BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041741
         (220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containi...    98   8e-19
emb|CBI23204.3| unnamed protein product [Vitis vinifera]               98   8e-19
ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containi...    92   3e-17
ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containi...    86   3e-15
ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containi...    82   3e-14

>ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Vitis vinifera]
          Length = 732

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 45/72 (62%), Positives = 58/72 (80%)
 Frame = -3

Query: 218 RQRMRVDMAVQNSLVTMYAKCGHLEQSWFVFDSALDKDVVTWNAIVASYAQNGHLHRSLF 39
           RQR+++D+  QNSLVTMYAKCGHLEQS  VFD    +D+V+WNAIV+ +AQNGHL ++L 
Sbjct: 376 RQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALL 435

Query: 38  LFEKMRAANERP 3
           LF +MR A +RP
Sbjct: 436 LFNEMRKARQRP 447



 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 23/66 (34%), Positives = 42/66 (63%)
 Frame = -3

Query: 200 DMAVQNSLVTMYAKCGHLEQSWFVFDSALDKDVVTWNAIVASYAQNGHLHRSLFLFEKMR 21
           D+A+ NS++ +Y KCG +E +  +F+    +DV++WN++V+ YAQ G++   L L  +M+
Sbjct: 180 DVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMK 239

Query: 20  AANERP 3
                P
Sbjct: 240 TDGIEP 245


>emb|CBI23204.3| unnamed protein product [Vitis vinifera]
          Length = 907

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 45/72 (62%), Positives = 58/72 (80%)
 Frame = -3

Query: 218 RQRMRVDMAVQNSLVTMYAKCGHLEQSWFVFDSALDKDVVTWNAIVASYAQNGHLHRSLF 39
           RQR+++D+  QNSLVTMYAKCGHLEQS  VFD    +D+V+WNAIV+ +AQNGHL ++L 
Sbjct: 376 RQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALL 435

Query: 38  LFEKMRAANERP 3
           LF +MR A +RP
Sbjct: 436 LFNEMRKARQRP 447



 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 23/66 (34%), Positives = 42/66 (63%)
 Frame = -3

Query: 200 DMAVQNSLVTMYAKCGHLEQSWFVFDSALDKDVVTWNAIVASYAQNGHLHRSLFLFEKMR 21
           D+A+ NS++ +Y KCG +E +  +F+    +DV++WN++V+ YAQ G++   L L  +M+
Sbjct: 180 DVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMK 239

Query: 20  AANERP 3
                P
Sbjct: 240 TDGIEP 245


>ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Glycine max]
          Length = 755

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 42/72 (58%), Positives = 56/72 (77%)
 Frame = -3

Query: 218 RQRMRVDMAVQNSLVTMYAKCGHLEQSWFVFDSALDKDVVTWNAIVASYAQNGHLHRSLF 39
           RQ + +D+A QNSLVTMYAKCGHL+QS  VFD    +D+V+WNA+V  YAQNG++  +LF
Sbjct: 389 RQELPLDVATQNSLVTMYAKCGHLDQSSIVFDMMNRRDLVSWNAMVTGYAQNGYVCEALF 448

Query: 38  LFEKMRAANERP 3
           LF +MR+ N+ P
Sbjct: 449 LFNEMRSDNQTP 460



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 23/60 (38%), Positives = 42/60 (70%)
 Frame = -3

Query: 200 DMAVQNSLVTMYAKCGHLEQSWFVFDSALDKDVVTWNAIVASYAQNGHLHRSLFLFEKMR 21
           D+ + NS++ +Y KCG++E S  +FD    +D+V+WN+++++YAQ G++   L L + MR
Sbjct: 193 DINLSNSMLNVYGKCGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGNICEVLLLLKTMR 252


>ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Glycine max]
          Length = 764

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 37/72 (51%), Positives = 56/72 (77%)
 Frame = -3

Query: 218 RQRMRVDMAVQNSLVTMYAKCGHLEQSWFVFDSALDKDVVTWNAIVASYAQNGHLHRSLF 39
           R  + +D+A QNSLVTM+AKCGHL+QS  VFD    +++V+WNA++  YAQNG++ ++LF
Sbjct: 397 RHELPMDIATQNSLVTMHAKCGHLDQSSIVFDKMNKRNLVSWNAMITGYAQNGYVCKALF 456

Query: 38  LFEKMRAANERP 3
           LF +MR+ ++ P
Sbjct: 457 LFNEMRSDHQTP 468



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 25/66 (37%), Positives = 43/66 (65%)
 Frame = -3

Query: 200 DMAVQNSLVTMYAKCGHLEQSWFVFDSALDKDVVTWNAIVASYAQNGHLHRSLFLFEKMR 21
           D+ + NS+++MY KC ++E S  +FD    +D+V+WN++V++YAQ G++   L L + MR
Sbjct: 201 DINLSNSMLSMYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLLKTMR 260

Query: 20  AANERP 3
                P
Sbjct: 261 IQGFEP 266



 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 23/60 (38%), Positives = 41/60 (68%)
 Frame = -3

Query: 203 VDMAVQNSLVTMYAKCGHLEQSWFVFDSALDKDVVTWNAIVASYAQNGHLHRSLFLFEKM 24
           +D  V+ SL+ MY K G+++ ++ +F+ +LDKDVV W A+++   QNG   ++L +F +M
Sbjct: 301 LDAHVETSLIVMYLKGGNIDIAFRMFERSLDKDVVLWTAMISGLVQNGSADKALAVFRQM 360


>ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Cucumis sativus]
          Length = 743

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 37/72 (51%), Positives = 54/72 (75%)
 Frame = -3

Query: 218 RQRMRVDMAVQNSLVTMYAKCGHLEQSWFVFDSALDKDVVTWNAIVASYAQNGHLHRSLF 39
           RQ + +D+  QNSLVTMYAKC  L+QS  +F+  ++KD+V+WNAIVA +A+NG+L + +F
Sbjct: 377 RQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLSKGIF 436

Query: 38  LFEKMRAANERP 3
            F +MR +  RP
Sbjct: 437 FFNEMRKSFLRP 448