BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041738
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267761.2| PREDICTED: pentatricopeptide repeat-containi...    69   3e-10
ref|XP_004140857.1| PREDICTED: pentatricopeptide repeat-containi...    64   1e-08
gb|AFW60783.1| hypothetical protein ZEAMMB73_487264 [Zea mays]         57   1e-06
ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group] g...    57   2e-06
gb|EAZ18367.1| hypothetical protein OsJ_33897 [Oryza sativa Japo...    57   2e-06

>ref|XP_002267761.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Vitis vinifera]
          Length = 650

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 15/99 (15%)
 Frame = +1

Query: 97  RELHARIIRNGLYTDPCLISQLVNCTNESR---------------PTSFLWTSILRAFSQ 231
           +ELHA +IR  L+TDP L+S ++   + S                PT  +W  ++R  SQ
Sbjct: 34  KELHAHLIRTQLHTDPFLMSDVIRSYSLSSTNLHKAHLVFNQIECPTLVVWNHMIRGLSQ 93

Query: 232 SGRPAHALHLFDQMRIRGVSLHPLTFIFFFKACARLHHI 348
           S  P  A+H++ +M  +G++ + LT IF FKACAR+  I
Sbjct: 94  SDHPVEAIHMYTRMHHQGITGNNLTLIFLFKACARVSDI 132


>ref|XP_004140857.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 593

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 15/104 (14%)
 Frame = +1

Query: 82  AMKVLRELHARIIRNGLYTDPCLISQLVN---------------CTNESRPTSFLWTSIL 216
           ++  ++ELHA+++R  ++ DP  IS+++                     RPT  +W  ++
Sbjct: 26  SLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSPQSLPKAHFVFNQIQRPTLLVWNHMI 85

Query: 217 RAFSQSGRPAHALHLFDQMRIRGVSLHPLTFIFFFKACARLHHI 348
              S+S RP  A+H ++ M  +G+    LTFIF FK+CAR+  +
Sbjct: 86  HGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCARVSDV 129


>gb|AFW60783.1| hypothetical protein ZEAMMB73_487264 [Zea mays]
          Length = 770

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 14/99 (14%)
 Frame = +1

Query: 79  VAMKVLRELHARIIRNGLYTDPCLISQLVNCTNE--------------SRPTSFLWTSIL 216
           +A++   ++HA+ I+ G  +D  + S LVN  N+              S  T   WTS++
Sbjct: 407 MALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEDATKAFVEMSIRTLVTWTSMI 466

Query: 217 RAFSQSGRPAHALHLFDQMRIRGVSLHPLTFIFFFKACA 333
             +SQ GRP  A+ LF+ MR  GV  + +TF+    AC+
Sbjct: 467 SGYSQHGRPQEAIQLFEDMRFAGVRPNEITFVCVLSACS 505


>ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
           gi|77550880|gb|ABA93677.1| PPR986-12, putative,
           expressed [Oryza sativa Japonica Group]
           gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa
           Japonica Group]
          Length = 770

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 14/99 (14%)
 Frame = +1

Query: 79  VAMKVLRELHARIIRNGLYTDPCLISQLVNCTNES--------------RPTSFLWTSIL 216
           +A++   ++HA+ I++G  +D  + S LVN  N+                 T   WTS++
Sbjct: 407 MALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMI 466

Query: 217 RAFSQSGRPAHALHLFDQMRIRGVSLHPLTFIFFFKACA 333
             +SQ G+P  A+ LF++MR+ GV  + +TF+    AC+
Sbjct: 467 SGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACS 505


>gb|EAZ18367.1| hypothetical protein OsJ_33897 [Oryza sativa Japonica Group]
          Length = 730

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 14/99 (14%)
 Frame = +1

Query: 79  VAMKVLRELHARIIRNGLYTDPCLISQLVNCTNES--------------RPTSFLWTSIL 216
           +A++   ++HA+ I++G  +D  + S LVN  N+                 T   WTS++
Sbjct: 367 MALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMI 426

Query: 217 RAFSQSGRPAHALHLFDQMRIRGVSLHPLTFIFFFKACA 333
             +SQ G+P  A+ LF++MR+ GV  + +TF+    AC+
Sbjct: 427 SGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACS 465