BLASTX nr result

ID: Coptis23_contig00041715 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041715
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273963.2| PREDICTED: putative UDP-rhamnose:rhamnosyltr...    67   1e-09
ref|XP_003635104.1| PREDICTED: putative UDP-rhamnose:rhamnosyltr...    67   1e-09
emb|CAN73977.1| hypothetical protein VITISV_022298 [Vitis vinifera]    67   1e-09
ref|XP_002315125.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_003635103.1| PREDICTED: LOW QUALITY PROTEIN: putative UDP...    66   3e-09

>ref|XP_002273963.2| PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1, partial
           [Vitis vinifera]
          Length = 302

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 42/112 (37%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
 Frame = -2

Query: 317 DGGSRLNPEDFLVPPKWISFPSNLALPFYEAPKGDEYKDP-------IYRTGSAIQGCEF 159
           DG  R     F VPP W+ FPSNL LP ++      Y  P        YR GS I  C+ 
Sbjct: 157 DGDPRKELHQFAVPPPWVPFPSNLGLPPFQMKTVLGYDQPNLSGVSDSYRMGSVISACDV 216

Query: 158 MAVRSCIXXXXXXXXXXXXXXXLKPVVAVGLLPPPRIQNSHVEDGRWVPIKE 3
           +AVRSC                 KPV+ +GLLPP  +     ED  W+PI E
Sbjct: 217 VAVRSC-AELESEWLDLLRELYHKPVLPIGLLPP--LAPVSGEDDSWIPILE 265


>ref|XP_003635104.1| PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1-like [Vitis
           vinifera]
          Length = 308

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 42/112 (37%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
 Frame = -2

Query: 317 DGGSRLNPEDFLVPPKWISFPSNLALPFYEAPKGDEYKDP-------IYRTGSAIQGCEF 159
           DG  R     F VPP W+ FPSNL LP ++      Y  P        YR GS I  C+ 
Sbjct: 3   DGDPRKELHQFAVPPPWVPFPSNLGLPPFQMKTVLGYDQPNLSGVSDSYRMGSVISACDV 62

Query: 158 MAVRSCIXXXXXXXXXXXXXXXLKPVVAVGLLPPPRIQNSHVEDGRWVPIKE 3
           +AVRSC                 KPV+ +GLLPP  +     ED  W+PI E
Sbjct: 63  VAVRSC-AELESEWLDLLRELYHKPVLPIGLLPP--LAPVSGEDDSWIPILE 111


>emb|CAN73977.1| hypothetical protein VITISV_022298 [Vitis vinifera]
          Length = 438

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 42/112 (37%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
 Frame = -2

Query: 317 DGGSRLNPEDFLVPPKWISFPSNLALPFYEAPKGDEYKDP-------IYRTGSAIQGCEF 159
           DG  R     F VPP W+ FPSNL LP ++      Y  P        YR GS I  C+ 
Sbjct: 157 DGDPRKELHQFAVPPPWVPFPSNLGLPPFQMKTVLGYDQPNLSGVSDSYRMGSVISACDV 216

Query: 158 MAVRSCIXXXXXXXXXXXXXXXLKPVVAVGLLPPPRIQNSHVEDGRWVPIKE 3
           +AVRSC                 KPV+ +GLLPP  +     ED  W+PI E
Sbjct: 217 VAVRSC-AELESEWLDLLRELYHKPVLPIGLLPP--LAPVSGEDDSWIPILE 265


>ref|XP_002315125.1| predicted protein [Populus trichocarpa] gi|222864165|gb|EEF01296.1|
           predicted protein [Populus trichocarpa]
          Length = 452

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 41/113 (36%), Positives = 55/113 (48%), Gaps = 12/113 (10%)
 Frame = -2

Query: 305 RLNPEDFLVPPKWISFPSNLALPFYEAPK-------GDEYKDPIYRTGSAIQGCEFMAVR 147
           R  P+ F VPPKW++FPS +A   +EA +              I+R GS + GC+ +AVR
Sbjct: 162 RTEPQHFTVPPKWVTFPSKVAFRIHEAKRFLVQIEANSSGVTDIFRWGSVLAGCDVIAVR 221

Query: 146 SCIXXXXXXXXXXXXXXXLKPVVAVGLLPPPR--IQNSHVEDG---RWVPIKE 3
           SC+                KPV+ VGLLPPP    +    E G   +WV I E
Sbjct: 222 SCL-ELEADFLRLVEDLHCKPVIPVGLLPPPAQCSEGGSREGGVDEKWVTISE 273


>ref|XP_003635103.1| PREDICTED: LOW QUALITY PROTEIN: putative
           UDP-rhamnose:rhamnosyltransferase 1-like [Vitis
           vinifera]
          Length = 462

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 41/111 (36%), Positives = 51/111 (45%), Gaps = 7/111 (6%)
 Frame = -2

Query: 314 GGSRLNPEDFLVPPKWISFPSNLALPFYEAPKGDEYKDP-------IYRTGSAIQGCEFM 156
           G  R     F VPP W+ FPSNL LP ++  +   Y  P        YR GS I  C+ +
Sbjct: 158 GDPRKELHQFAVPPPWVPFPSNLGLPPFQMKRILGYDQPNLSGVSDSYRMGSVISACDVV 217

Query: 155 AVRSCIXXXXXXXXXXXXXXXLKPVVAVGLLPPPRIQNSHVEDGRWVPIKE 3
           AVRSC                 KPV+ +GLLPP  +     ED  W+PI E
Sbjct: 218 AVRSC-AELESEWLDLLRELYHKPVLPIGLLPP--LAPVSGEDDSWIPILE 265


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