BLASTX nr result

ID: Coptis23_contig00041709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041709
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522264.1| replication factor C / DNA polymerase III ga...   103   1e-20
ref|XP_003547181.1| PREDICTED: uncharacterized protein LOC100793...   102   2e-20
ref|XP_003542971.1| PREDICTED: uncharacterized protein LOC100809...   102   2e-20
emb|CBI30725.3| unnamed protein product [Vitis vinifera]              102   3e-20
ref|XP_002265273.1| PREDICTED: uncharacterized protein LOC100249...   102   3e-20

>ref|XP_002522264.1| replication factor C / DNA polymerase III gamma-tau subunit,
           putative [Ricinus communis] gi|223538517|gb|EEF40122.1|
           replication factor C / DNA polymerase III gamma-tau
           subunit, putative [Ricinus communis]
          Length = 1105

 Score =  103 bits (258), Expect = 1e-20
 Identities = 46/60 (76%), Positives = 54/60 (90%)
 Frame = +1

Query: 64  MTRAVHARFIKDDNGAISDHLRNHVHLTNCIHLKNHMHRQSPVMAERSLMRDLIALQRSK 243
           MT+AV  R +KD NG ISDHLRNH+HLTNCIHLKNHMH+QSP++A+RSLMRDLI LQRS+
Sbjct: 1   MTKAVRNRILKDANGHISDHLRNHIHLTNCIHLKNHMHKQSPILADRSLMRDLIVLQRSR 60


>ref|XP_003547181.1| PREDICTED: uncharacterized protein LOC100793832 [Glycine max]
          Length = 1191

 Score =  102 bits (255), Expect = 2e-20
 Identities = 44/60 (73%), Positives = 54/60 (90%)
 Frame = +1

Query: 64  MTRAVHARFIKDDNGAISDHLRNHVHLTNCIHLKNHMHRQSPVMAERSLMRDLIALQRSK 243
           MTRAV +R +KD NG ISDHLRNH+HLTNCIHLKNHMH+ SP++A+RS+MRDL+ LQRS+
Sbjct: 1   MTRAVRSRVLKDANGDISDHLRNHIHLTNCIHLKNHMHKNSPILADRSIMRDLVVLQRSR 60


>ref|XP_003542971.1| PREDICTED: uncharacterized protein LOC100809005 [Glycine max]
          Length = 1101

 Score =  102 bits (255), Expect = 2e-20
 Identities = 44/60 (73%), Positives = 54/60 (90%)
 Frame = +1

Query: 64  MTRAVHARFIKDDNGAISDHLRNHVHLTNCIHLKNHMHRQSPVMAERSLMRDLIALQRSK 243
           MTRAV +R +KD NG ISDHLRNH+HLTNCIHLKNHMH+ SP++A+RS+MRDL+ LQRS+
Sbjct: 1   MTRAVRSRVLKDANGDISDHLRNHIHLTNCIHLKNHMHKNSPILADRSIMRDLVVLQRSR 60


>emb|CBI30725.3| unnamed protein product [Vitis vinifera]
          Length = 919

 Score =  102 bits (254), Expect = 3e-20
 Identities = 45/60 (75%), Positives = 53/60 (88%)
 Frame = +1

Query: 64  MTRAVHARFIKDDNGAISDHLRNHVHLTNCIHLKNHMHRQSPVMAERSLMRDLIALQRSK 243
           MTRAV  R +KD NG ISDHLRNH+HLTNCIHLKNHMH+ SP++A+RS+MRDLI LQRS+
Sbjct: 1   MTRAVRDRILKDANGDISDHLRNHIHLTNCIHLKNHMHKHSPILADRSIMRDLIVLQRSR 60


>ref|XP_002265273.1| PREDICTED: uncharacterized protein LOC100249702 [Vitis vinifera]
          Length = 1161

 Score =  102 bits (254), Expect = 3e-20
 Identities = 45/60 (75%), Positives = 53/60 (88%)
 Frame = +1

Query: 64  MTRAVHARFIKDDNGAISDHLRNHVHLTNCIHLKNHMHRQSPVMAERSLMRDLIALQRSK 243
           MTRAV  R +KD NG ISDHLRNH+HLTNCIHLKNHMH+ SP++A+RS+MRDLI LQRS+
Sbjct: 1   MTRAVRDRILKDANGDISDHLRNHIHLTNCIHLKNHMHKHSPILADRSIMRDLIVLQRSR 60


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