BLASTX nr result

ID: Coptis23_contig00041691 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041691
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299096.1| predicted protein [Populus trichocarpa] gi|2...   139   2e-31
emb|CBI16560.3| unnamed protein product [Vitis vinifera]              138   5e-31
emb|CAN77487.1| hypothetical protein VITISV_020248 [Vitis vinifera]   138   5e-31
ref|NP_567744.1| Subtilisin-like serine endopeptidase family pro...   133   1e-29
ref|XP_002869615.1| predicted protein [Arabidopsis lyrata subsp....   132   3e-29

>ref|XP_002299096.1| predicted protein [Populus trichocarpa] gi|222846354|gb|EEE83901.1|
           predicted protein [Populus trichocarpa]
          Length = 791

 Score =  139 bits (351), Expect = 2e-31
 Identities = 64/84 (76%), Positives = 72/84 (85%)
 Frame = -3

Query: 257 RGGAPRSRLAIYKVCWSIELDGRCTEADILAAFDDALHDGIHVISASFGGSTPLLPFFAS 78
           RGGAPR+RLA+YKVCW   LDG C EADILAAFDDALHDG+++ISASFG   PL PFF+S
Sbjct: 245 RGGAPRARLAVYKVCWGKNLDGNCAEADILAAFDDALHDGVNIISASFGSDPPLTPFFSS 304

Query: 77  SSDIGSFHAMQLGISVVFSGGNDG 6
           S+DIGSFHAMQLG+S VFS GN G
Sbjct: 305 SADIGSFHAMQLGVSSVFSAGNAG 328


>emb|CBI16560.3| unnamed protein product [Vitis vinifera]
          Length = 772

 Score =  138 bits (347), Expect = 5e-31
 Identities = 63/84 (75%), Positives = 73/84 (86%)
 Frame = -3

Query: 257 RGGAPRSRLAIYKVCWSIELDGRCTEADILAAFDDALHDGIHVISASFGGSTPLLPFFAS 78
           RGGAPR+RLA+YKVCW+  L+G C+EADI+A FD+ALHDG+HVISASFGG  PL PFF S
Sbjct: 245 RGGAPRTRLAVYKVCWNEGLEGICSEADIMAGFDNALHDGVHVISASFGGGPPLRPFFKS 304

Query: 77  SSDIGSFHAMQLGISVVFSGGNDG 6
            + IGSFHAMQLG+SVVFS GNDG
Sbjct: 305 QAGIGSFHAMQLGVSVVFSAGNDG 328


>emb|CAN77487.1| hypothetical protein VITISV_020248 [Vitis vinifera]
          Length = 681

 Score =  138 bits (347), Expect = 5e-31
 Identities = 63/84 (75%), Positives = 73/84 (86%)
 Frame = -3

Query: 257 RGGAPRSRLAIYKVCWSIELDGRCTEADILAAFDDALHDGIHVISASFGGSTPLLPFFAS 78
           RGGAPR+RLA+YKVCW+  L+G C+EADI+A FD+ALHDG+HVISASFGG  PL PFF S
Sbjct: 154 RGGAPRTRLAVYKVCWNEGLEGICSEADIMAGFDNALHDGVHVISASFGGGPPLRPFFKS 213

Query: 77  SSDIGSFHAMQLGISVVFSGGNDG 6
            + IGSFHAMQLG+SVVFS GNDG
Sbjct: 214 QAGIGSFHAMQLGVSVVFSAGNDG 237


>ref|NP_567744.1| Subtilisin-like serine endopeptidase family protein [Arabidopsis
           thaliana] gi|4539429|emb|CAB38962.1| subtilisin
           protease-like [Arabidopsis thaliana]
           gi|7269485|emb|CAB79488.1| subtilisin protease-like
           [Arabidopsis thaliana] gi|332659786|gb|AEE85186.1|
           Subtilisin-like serine endopeptidase family protein
           [Arabidopsis thaliana]
          Length = 746

 Score =  133 bits (335), Expect = 1e-29
 Identities = 62/84 (73%), Positives = 72/84 (85%)
 Frame = -3

Query: 257 RGGAPRSRLAIYKVCWSIELDGRCTEADILAAFDDALHDGIHVISASFGGSTPLLPFFAS 78
           RGGAP +RLA++K CW  +L+G CTEADILAAFDDA+HDG+HVISASFG S PL PFF S
Sbjct: 216 RGGAPLARLAVFKTCWGKDLEGVCTEADILAAFDDAIHDGVHVISASFGYSPPLSPFFES 275

Query: 77  SSDIGSFHAMQLGISVVFSGGNDG 6
           S+DIG+FHA + GISVVFS GNDG
Sbjct: 276 SADIGAFHAAERGISVVFSTGNDG 299


>ref|XP_002869615.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297315451|gb|EFH45874.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 744

 Score =  132 bits (332), Expect = 3e-29
 Identities = 61/84 (72%), Positives = 73/84 (86%)
 Frame = -3

Query: 257 RGGAPRSRLAIYKVCWSIELDGRCTEADILAAFDDALHDGIHVISASFGGSTPLLPFFAS 78
           RGGAP +RLA++K CW  +L+G CTEADILAAFDDA+H+G++VISASFG S PL PFF S
Sbjct: 214 RGGAPSARLAVFKTCWGKDLEGVCTEADILAAFDDAIHNGVNVISASFGYSPPLSPFFES 273

Query: 77  SSDIGSFHAMQLGISVVFSGGNDG 6
           S+DIG+FHA + GISVVFSGGNDG
Sbjct: 274 SADIGAFHAAERGISVVFSGGNDG 297


Top