BLASTX nr result

ID: Coptis23_contig00041673 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041673
         (572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271742.1| PREDICTED: UDP-N-acetylmuramoyl-tripeptide--...    89   4e-16
emb|CBI35373.3| unnamed protein product [Vitis vinifera]               89   4e-16
ref|XP_002991204.1| hypothetical protein SELMODRAFT_133115 [Sela...    56   4e-06
ref|XP_002991267.1| hypothetical protein SELMODRAFT_185918 [Sela...    56   4e-06

>ref|XP_002271742.1| PREDICTED: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine
           ligase-like [Vitis vinifera]
          Length = 771

 Score = 89.4 bits (220), Expect = 4e-16
 Identities = 44/76 (57%), Positives = 52/76 (68%)
 Frame = +3

Query: 315 VNGKLIKWGPPGTICTDTRSLLKSSNNHSSPLVINQWFFAIVGKNFDGHDFISPELYVKG 494
           VNG +++ GPPG ICTDTR+L              QWFFAI G+NFD H+FI+PEL  KG
Sbjct: 322 VNGTIVQRGPPGPICTDTRTLEPG-----------QWFFAIRGENFDAHEFITPELGHKG 370

Query: 495 CVGVIGNRVCDN*DRG 542
           CVGVIGN VC N D+G
Sbjct: 371 CVGVIGNWVCPNWDKG 386


>emb|CBI35373.3| unnamed protein product [Vitis vinifera]
          Length = 510

 Score = 89.4 bits (220), Expect = 4e-16
 Identities = 44/76 (57%), Positives = 52/76 (68%)
 Frame = +3

Query: 315 VNGKLIKWGPPGTICTDTRSLLKSSNNHSSPLVINQWFFAIVGKNFDGHDFISPELYVKG 494
           VNG +++ GPPG ICTDTR+L              QWFFAI G+NFD H+FI+PEL  KG
Sbjct: 61  VNGTIVQRGPPGPICTDTRTLEPG-----------QWFFAIRGENFDAHEFITPELGHKG 109

Query: 495 CVGVIGNRVCDN*DRG 542
           CVGVIGN VC N D+G
Sbjct: 110 CVGVIGNWVCPNWDKG 125


>ref|XP_002991204.1| hypothetical protein SELMODRAFT_133115 [Selaginella moellendorffii]
           gi|300141032|gb|EFJ07748.1| hypothetical protein
           SELMODRAFT_133115 [Selaginella moellendorffii]
          Length = 515

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 29/66 (43%), Positives = 37/66 (56%)
 Frame = +3

Query: 315 VNGKLIKWGPPGTICTDTRSLLKSSNNHSSPLVINQWFFAIVGKNFDGHDFISPELYVKG 494
           V G L K G PG+ICTDTR + +             WF A+VG+NFDG+ F++  L   G
Sbjct: 59  VGGILAKQGSPGSICTDTRGIHRGD-----------WFLALVGRNFDGNSFLAQAL-AAG 106

Query: 495 CVGVIG 512
           C G IG
Sbjct: 107 CAGAIG 112


>ref|XP_002991267.1| hypothetical protein SELMODRAFT_185918 [Selaginella moellendorffii]
           gi|300140978|gb|EFJ07695.1| hypothetical protein
           SELMODRAFT_185918 [Selaginella moellendorffii]
          Length = 515

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 29/66 (43%), Positives = 37/66 (56%)
 Frame = +3

Query: 315 VNGKLIKWGPPGTICTDTRSLLKSSNNHSSPLVINQWFFAIVGKNFDGHDFISPELYVKG 494
           V G L K G PG+ICTDTR + +             WF A+VG+NFDG+ F++  L   G
Sbjct: 59  VGGILAKQGSPGSICTDTRGIHRGD-----------WFLALVGRNFDGNSFLAQAL-AAG 106

Query: 495 CVGVIG 512
           C G IG
Sbjct: 107 CAGAIG 112


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