BLASTX nr result

ID: Coptis23_contig00041645 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041645
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329845.1| predicted protein [Populus trichocarpa] gi|2...   163   1e-38
ref|XP_003550892.1| PREDICTED: MATE efflux family protein DTX1-l...   160   1e-37
ref|XP_002304444.1| predicted protein [Populus trichocarpa] gi|2...   160   1e-37
ref|XP_003525554.1| PREDICTED: MATE efflux family protein DTX1-l...   156   2e-36
ref|XP_002867749.1| mate efflux family protein [Arabidopsis lyra...   154   9e-36

>ref|XP_002329845.1| predicted protein [Populus trichocarpa] gi|222871082|gb|EEF08213.1|
           predicted protein [Populus trichocarpa]
          Length = 456

 Score =  163 bits (413), Expect = 1e-38
 Identities = 78/109 (71%), Positives = 88/109 (80%)
 Frame = -2

Query: 327 RLVRLSGPCCLTTCLEWWCYEILVLLTGRLPNXXXXXXXXXXXLNFDYLLYSIMLSLATC 148
           RL++L  PCCLTTCLEWWC+EIL+LLTGRLPN           LNFDYLL+S+MLSLATC
Sbjct: 233 RLLKLCAPCCLTTCLEWWCWEILILLTGRLPNAKQAVGVIAIVLNFDYLLFSVMLSLATC 292

Query: 147 ASTRVSNELGSNHAEQAYKSAYVSLGVSVIFGCIGGSLMVSVRGVWGSL 1
           ASTRVSNELG+N A +AY+SAYVSLG S I GCIG  +MV VRGVWGSL
Sbjct: 293 ASTRVSNELGANQAGRAYQSAYVSLGASTISGCIGALVMVGVRGVWGSL 341


>ref|XP_003550892.1| PREDICTED: MATE efflux family protein DTX1-like [Glycine max]
          Length = 468

 Score =  160 bits (405), Expect = 1e-37
 Identities = 79/109 (72%), Positives = 86/109 (78%)
 Frame = -2

Query: 327 RLVRLSGPCCLTTCLEWWCYEILVLLTGRLPNXXXXXXXXXXXLNFDYLLYSIMLSLATC 148
           RL++LSG CCL TCLEWWCYEILVLLTG L N           LNFDYLLYS+MLSLATC
Sbjct: 231 RLMKLSGSCCLNTCLEWWCYEILVLLTGHLANAKQALGVLAIVLNFDYLLYSVMLSLATC 290

Query: 147 ASTRVSNELGSNHAEQAYKSAYVSLGVSVIFGCIGGSLMVSVRGVWGSL 1
            STRVSNELG+N A QAYKSA VSL V VI GCIGGS+MV+ RGVWG+L
Sbjct: 291 VSTRVSNELGANSAGQAYKSARVSLAVGVISGCIGGSMMVASRGVWGNL 339


>ref|XP_002304444.1| predicted protein [Populus trichocarpa] gi|222841876|gb|EEE79423.1|
           predicted protein [Populus trichocarpa]
          Length = 462

 Score =  160 bits (404), Expect = 1e-37
 Identities = 73/109 (66%), Positives = 87/109 (79%)
 Frame = -2

Query: 327 RLVRLSGPCCLTTCLEWWCYEILVLLTGRLPNXXXXXXXXXXXLNFDYLLYSIMLSLATC 148
           +L++L  PCCLTTCLEWWC+EILVLLTGRLPN           +NFDYLL+S+MLSLATC
Sbjct: 248 KLLKLCAPCCLTTCLEWWCWEILVLLTGRLPNARQAVGVVAIVMNFDYLLFSVMLSLATC 307

Query: 147 ASTRVSNELGSNHAEQAYKSAYVSLGVSVIFGCIGGSLMVSVRGVWGSL 1
           ASTRVSNELG+N A +AY+SAYVSLG S + GC+G  +M+  RGVWGSL
Sbjct: 308 ASTRVSNELGANQAGRAYQSAYVSLGASTVSGCVGALVMIGARGVWGSL 356


>ref|XP_003525554.1| PREDICTED: MATE efflux family protein DTX1-like [Glycine max]
          Length = 525

 Score =  156 bits (394), Expect = 2e-36
 Identities = 76/109 (69%), Positives = 85/109 (77%)
 Frame = -2

Query: 327 RLVRLSGPCCLTTCLEWWCYEILVLLTGRLPNXXXXXXXXXXXLNFDYLLYSIMLSLATC 148
           RL++LSG CCL TCLEWWCYEIL+ LTG L N           LNFDYLLY++MLSLAT 
Sbjct: 270 RLIKLSGSCCLNTCLEWWCYEILLFLTGHLANAKQAVGVLAIVLNFDYLLYAVMLSLATS 329

Query: 147 ASTRVSNELGSNHAEQAYKSAYVSLGVSVIFGCIGGSLMVSVRGVWGSL 1
            STRVSNELG+N A QAYKSA VSL VSVI GCIGGS+MV+ RGVWG+L
Sbjct: 330 VSTRVSNELGANRAGQAYKSARVSLAVSVISGCIGGSIMVAARGVWGNL 378


>ref|XP_002867749.1| mate efflux family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297313585|gb|EFH44008.1| mate efflux family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 487

 Score =  154 bits (388), Expect = 9e-36
 Identities = 70/108 (64%), Positives = 84/108 (77%)
 Frame = -2

Query: 324 LVRLSGPCCLTTCLEWWCYEILVLLTGRLPNXXXXXXXXXXXLNFDYLLYSIMLSLATCA 145
           L++LSGPCCLT CLEWWCYEILVLLTGRLPN            NFDYLLY++MLSL TC 
Sbjct: 258 LIKLSGPCCLTVCLEWWCYEILVLLTGRLPNPVQAVSILIIVFNFDYLLYAVMLSLGTCV 317

Query: 144 STRVSNELGSNHAEQAYKSAYVSLGVSVIFGCIGGSLMVSVRGVWGSL 1
           +TRVSNELG+N+ + AY++AY +L V VI GCIG  +M++ RGVWGSL
Sbjct: 318 ATRVSNELGANNPKGAYRAAYTTLIVGVISGCIGALVMITCRGVWGSL 365


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