BLASTX nr result

ID: Coptis23_contig00041641 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041641
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532328.1| Osmotic avoidance abnormal protein, putative...   215   5e-54
ref|XP_002270444.1| PREDICTED: kinesin-like protein KIF22-B [Vit...   213   2e-53
emb|CAN60160.1| hypothetical protein VITISV_007130 [Vitis vinifera]   213   2e-53
ref|XP_004137940.1| PREDICTED: kinesin-like protein KIF22-like [...   209   2e-52
ref|XP_002309056.1| predicted protein [Populus trichocarpa] gi|2...   208   6e-52

>ref|XP_002532328.1| Osmotic avoidance abnormal protein, putative [Ricinus communis]
           gi|223527971|gb|EEF30055.1| Osmotic avoidance abnormal
           protein, putative [Ricinus communis]
          Length = 644

 Score =  215 bits (547), Expect = 5e-54
 Identities = 117/203 (57%), Positives = 144/203 (70%), Gaps = 14/203 (6%)
 Frame = +1

Query: 1   QMETPSQNT----KTSKQHSLISKVRVIVRLRP-------SSTNPITN--ISLLKPSDQN 141
           ++ET S NT    KT    S ISKVRVIVR+RP       S    +T+  IS++   D  
Sbjct: 2   EVETSSLNTPRSIKTCMDTSFISKVRVIVRVRPFLPQEIASKNGTLTSCCISVIDREDCE 61

Query: 142 LRNEVIVRLQDQLTSRNECFELDSFFGQE-SSVSQIFEKEVTPLISWVFNGFNATVFTYG 318
              EV VRLQD  TSR EC++LDSFFGQE +S+ +IFE+EV PLI  +F GFNATVF YG
Sbjct: 62  SEEEVTVRLQDPDTSRKECYQLDSFFGQEDNSICKIFEREVRPLIPGIFEGFNATVFAYG 121

Query: 319 GSGSGKTFTMQGNDELPGLMPLSMSMVLEMCEKSGSFAEISYYEVYMDRCYDLLEPKGQE 498
            +GSGKT+TMQG D+LPGLM L+MS +L MC+  GS  +ISYYEVYMDRCYDLLE K +E
Sbjct: 122 ATGSGKTYTMQGTDKLPGLMTLAMSTILSMCQSRGSKVDISYYEVYMDRCYDLLELKAKE 181

Query: 499 ICLLEDKDGQVHLKGLSRIRVSS 567
           I +L+DKD Q HLKGLS++  +S
Sbjct: 182 IEILDDKDKQTHLKGLSKVSANS 204


>ref|XP_002270444.1| PREDICTED: kinesin-like protein KIF22-B [Vitis vinifera]
           gi|297740374|emb|CBI30556.3| unnamed protein product
           [Vitis vinifera]
          Length = 659

 Score =  213 bits (542), Expect = 2e-53
 Identities = 114/196 (58%), Positives = 141/196 (71%), Gaps = 10/196 (5%)
 Frame = +1

Query: 10  TPSQNTKTSKQHSLISKVRVIVRLRP---------SSTNPITNISLLKPSDQNLRNEVIV 162
           TP +      Q + ISKVRVIVR+RP          + NPI+  S+L   D     EV+V
Sbjct: 7   TPKKANTMQLQSTSISKVRVIVRVRPFLPHEIAAAKNGNPISCASVLD-QDCESGEEVVV 65

Query: 163 RLQDQLTSRNECFELDSFFG-QESSVSQIFEKEVTPLISWVFNGFNATVFTYGGSGSGKT 339
            L DQ TSR EC++LDSF G  +++VS IF +EV+PLI  +F+G NATVF YG +GSGKT
Sbjct: 66  HLNDQETSRRECYKLDSFLGPHDNNVSLIFYREVSPLIPGIFHGCNATVFAYGATGSGKT 125

Query: 340 FTMQGNDELPGLMPLSMSMVLEMCEKSGSFAEISYYEVYMDRCYDLLEPKGQEICLLEDK 519
           +TMQG DELPGLMPL+MS VL MC  + S AE+SYYEVYMDRCYDLLE K +EI +L+DK
Sbjct: 126 YTMQGTDELPGLMPLTMSAVLTMCWSTASTAEMSYYEVYMDRCYDLLEVKAKEIAILDDK 185

Query: 520 DGQVHLKGLSRIRVSS 567
           DGQ+HLKGLSR+ +SS
Sbjct: 186 DGQIHLKGLSRVPISS 201


>emb|CAN60160.1| hypothetical protein VITISV_007130 [Vitis vinifera]
          Length = 991

 Score =  213 bits (542), Expect = 2e-53
 Identities = 114/196 (58%), Positives = 141/196 (71%), Gaps = 10/196 (5%)
 Frame = +1

Query: 10  TPSQNTKTSKQHSLISKVRVIVRLRP---------SSTNPITNISLLKPSDQNLRNEVIV 162
           TP +      Q + ISKVRVIVR+RP          + NPI+  S+L   D     EV+V
Sbjct: 7   TPKKANTMQLQSTSISKVRVIVRVRPFLPHEIAAAKNGNPISCASVLD-QDCESGEEVVV 65

Query: 163 RLQDQLTSRNECFELDSFFG-QESSVSQIFEKEVTPLISWVFNGFNATVFTYGGSGSGKT 339
            L DQ TSR EC++LDSF G  +++VS IF +EV+PLI  +F+G NATVF YG +GSGKT
Sbjct: 66  HLNDQETSRRECYKLDSFLGPHDNNVSLIFYREVSPLIPGIFHGCNATVFAYGATGSGKT 125

Query: 340 FTMQGNDELPGLMPLSMSMVLEMCEKSGSFAEISYYEVYMDRCYDLLEPKGQEICLLEDK 519
           +TMQG DELPGLMPL+MS VL MC  + S AE+SYYEVYMDRCYDLLE K +EI +L+DK
Sbjct: 126 YTMQGTDELPGLMPLTMSAVLTMCWSTASTAEMSYYEVYMDRCYDLLEVKAKEIAILDDK 185

Query: 520 DGQVHLKGLSRIRVSS 567
           DGQ+HLKGLSR+ +SS
Sbjct: 186 DGQIHLKGLSRVPISS 201


>ref|XP_004137940.1| PREDICTED: kinesin-like protein KIF22-like [Cucumis sativus]
           gi|449483641|ref|XP_004156646.1| PREDICTED: kinesin-like
           protein KIF22-like [Cucumis sativus]
          Length = 622

 Score =  209 bits (533), Expect = 2e-52
 Identities = 107/188 (56%), Positives = 142/188 (75%), Gaps = 10/188 (5%)
 Frame = +1

Query: 34  SKQHSLISKVRVIVRLRP---------SSTNPITNISLLKPSDQNLRNEVIVRLQDQLTS 186
           S  HS ISKVRV+ R+RP         S   P++ IS+L  + Q  + EV V L+D  TS
Sbjct: 11  STNHSAISKVRVVARVRPFLPLEGSVKSYRVPVSCISVLDQA-QISQEEVTVHLKDPETS 69

Query: 187 RNECFELDSFFGQES-SVSQIFEKEVTPLISWVFNGFNATVFTYGGSGSGKTFTMQGNDE 363
           RNEC++LDSF+GQE  +V QIF+KEV PLI  +F+G N TVF YG +GSGKT+TMQG +E
Sbjct: 70  RNECYQLDSFYGQEDHTVRQIFDKEVNPLIPGLFHGCNGTVFAYGATGSGKTYTMQGTEE 129

Query: 364 LPGLMPLSMSMVLEMCEKSGSFAEISYYEVYMDRCYDLLEPKGQEICLLEDKDGQVHLKG 543
            PGLMPL+MS +L +CE++G  AEISYYEVY++RC+DLLEPK +EI +L+DK+GQ+HL+G
Sbjct: 130 EPGLMPLAMSRILSLCEETGCRAEISYYEVYLERCHDLLEPKAKEIVILDDKEGQIHLRG 189

Query: 544 LSRIRVSS 567
           LS++ V+S
Sbjct: 190 LSKVAVNS 197


>ref|XP_002309056.1| predicted protein [Populus trichocarpa] gi|222855032|gb|EEE92579.1|
           predicted protein [Populus trichocarpa]
          Length = 585

 Score =  208 bits (529), Expect = 6e-52
 Identities = 111/196 (56%), Positives = 142/196 (72%), Gaps = 9/196 (4%)
 Frame = +1

Query: 7   ETPSQNTKTSKQHSLISKVRVIVRLRP--------SSTNPITNISLLKPSDQNLRNEVIV 162
           +TP          S  SKVRVIVR+RP         + NP + IS+L P D + R+EV V
Sbjct: 1   KTPKSLQTKPMDPSCTSKVRVIVRVRPFLSHEIPAKNGNPTSCISVLDP-DPDSRDEVTV 59

Query: 163 RLQDQLTSRNECFELDSFFGQE-SSVSQIFEKEVTPLISWVFNGFNATVFTYGGSGSGKT 339
            LQD  TSR EC++LD+FFGQE +++  IFE+EV+PLI  +F G NATVF YG +GSGKT
Sbjct: 60  HLQDPDTSRKECYQLDAFFGQEDNNLRSIFEREVSPLIPGMFRGRNATVFAYGATGSGKT 119

Query: 340 FTMQGNDELPGLMPLSMSMVLEMCEKSGSFAEISYYEVYMDRCYDLLEPKGQEICLLEDK 519
           +TMQG + LPGLMPL+MS +L MC+++GS AEISYYEVY++RCYDLLE   +EI + +DK
Sbjct: 120 YTMQGTNLLPGLMPLAMSTILSMCQRTGSRAEISYYEVYIERCYDLLEVGSKEIVIQDDK 179

Query: 520 DGQVHLKGLSRIRVSS 567
           DG VHLKGLSR+ V+S
Sbjct: 180 DGMVHLKGLSRVPVNS 195


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