BLASTX nr result

ID: Coptis23_contig00041631 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041631
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519429.1| Uracil permease, putative [Ricinus communis]...    63   3e-08
emb|CBI30184.3| unnamed protein product [Vitis vinifera]               60   2e-07
emb|CAN65774.1| hypothetical protein VITISV_030411 [Vitis vinifera]    60   2e-07

>ref|XP_002519429.1| Uracil permease, putative [Ricinus communis]
           gi|223541292|gb|EEF42843.1| Uracil permease, putative
           [Ricinus communis]
          Length = 566

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 42/106 (39%), Positives = 54/106 (50%), Gaps = 11/106 (10%)
 Frame = -2

Query: 285 MVSKCLSFNLHPHPHLTRFSGNSLNPIPSHILFPVTAVPITTKLT--------ITNTRCS 130
           MVSKC  FNLH H    +   + L   PS+   P+T    TTKL         +   RC+
Sbjct: 1   MVSKC--FNLHLHLTTAKPKSSRLPHFPSN---PLTPTVTTTKLNFPYGQNQFLPKKRCT 55

Query: 129 ---SFVMASRQFQYGPQYGEFEPDAGLINDDLRPTKPDERKFSGSE 1
              +  M S Q+    ++ EFEPD  L NDDL+PT P +R FSG E
Sbjct: 56  LLNTHHMGSSQYYKSSEFDEFEPDPTLTNDDLKPTTPSQRTFSGWE 101


>emb|CBI30184.3| unnamed protein product [Vitis vinifera]
          Length = 501

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 41/101 (40%), Positives = 58/101 (57%), Gaps = 8/101 (7%)
 Frame = -2

Query: 285 MVSKCLSFNLHPHPHLTRFSGNSLNPIPSHIL----FPVTAVPITTKLTITNTRCSSFVM 118
           MVSK LS +L P+PH +  S  +++P  +  L    FP T++P  TKL+++    S   M
Sbjct: 1   MVSKYLSLHLPPNPHSS--STTAISPTTTRFLTTRPFP-TSIP--TKLSVSRRWLSFSTM 55

Query: 117 ASRQFQYGP----QYGEFEPDAGLINDDLRPTKPDERKFSG 7
           AS Q    P    ++ +FEP   L NDDL+PT P +R FSG
Sbjct: 56  ASSQATPSPTPTSKFNDFEPHPTLTNDDLKPTAPHQRTFSG 96


>emb|CAN65774.1| hypothetical protein VITISV_030411 [Vitis vinifera]
          Length = 563

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 42/103 (40%), Positives = 58/103 (56%), Gaps = 8/103 (7%)
 Frame = -2

Query: 285 MVSKCLSFNLHPHPHLTRFSGNSLNPIPSHIL----FPVTAVPITTKLTITNTRCSSFVM 118
           MVSK LS +L P+PH +  S  +++P  +  L    FP T++P  TKL++     S   M
Sbjct: 1   MVSKYLSLHLPPNPHSS--STTAISPTTTRFLTTRPFP-TSIP--TKLSVXRRWLSFSTM 55

Query: 117 ASRQFQYGP----QYGEFEPDAGLINDDLRPTKPDERKFSGSE 1
           AS Q    P    ++ +FEP   L NDDL+PT P +R FSG E
Sbjct: 56  ASSQATPSPTPTXKFNDFEPHPTLTNDDLKPTAPHQRTFSGWE 98


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