BLASTX nr result

ID: Coptis23_contig00041623 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041623
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC68598.1| hypothetical protein OsI_36954 [Oryza sativa Indi...    93   3e-17
ref|NP_001172482.1| Os01g0646700 [Oryza sativa Japonica Group] g...    91   1e-16
gb|EEE55079.1| hypothetical protein OsJ_02812 [Oryza sativa Japo...    91   1e-16
gb|EEC71179.1| hypothetical protein OsI_03059 [Oryza sativa Indi...    91   1e-16
gb|AAM92800.1| putative DNA helicase homolog [Oryza sativa Japon...    89   4e-16

>gb|EEC68598.1| hypothetical protein OsI_36954 [Oryza sativa Indica Group]
          Length = 909

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 46/92 (50%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
 Frame = +3

Query: 3   CQYCGAKQFIHETSEICCGKGRIKLPRPSAPAELVQLFLDGGDL-GKHFRENIRSYNHIF 179
           C YCGAK+F +E+   CC KG+I       P EL +LF    D   K+FRENIR +N  F
Sbjct: 272 CSYCGAKRFQYESPAWCCRKGKIVFATHGVPDELHRLFTSQTDEDAKYFRENIRYFNSHF 331

Query: 180 AFTSMGVDFDKDLANGKDGVFSFRARASIYHR 275
           AFTS+GV  D+   NG  GV++FRA+  IYHR
Sbjct: 332 AFTSLGVTLDQRYCNGSSGVYTFRAQGQIYHR 363


>ref|NP_001172482.1| Os01g0646700 [Oryza sativa Japonica Group]
           gi|255673502|dbj|BAH91212.1| Os01g0646700, partial
           [Oryza sativa Japonica Group]
          Length = 162

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 41/90 (45%), Positives = 57/90 (63%)
 Frame = +3

Query: 3   CQYCGAKQFIHETSEICCGKGRIKLPRPSAPAELVQLFLDGGDLGKHFRENIRSYNHIFA 182
           C++CGAK+F +E    CC  G+IKL +   P EL++L+       KHFR+N R +N  F+
Sbjct: 66  CKHCGAKRFQYEPPSFCCRGGKIKLVQNETPPELMRLWTSSDPDAKHFRDNNRYFNGHFS 125

Query: 183 FTSMGVDFDKDLANGKDGVFSFRARASIYH 272
           FT++GV  DK  AN   GV++FRA   IYH
Sbjct: 126 FTTLGVSLDKAFANMSSGVYTFRAHGQIYH 155


>gb|EEE55079.1| hypothetical protein OsJ_02812 [Oryza sativa Japonica Group]
          Length = 1107

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 41/90 (45%), Positives = 57/90 (63%)
 Frame = +3

Query: 3   CQYCGAKQFIHETSEICCGKGRIKLPRPSAPAELVQLFLDGGDLGKHFRENIRSYNHIFA 182
           C++CGAK+F +E    CC  G+IKL +   P EL++L+       KHFR+N R +N  F+
Sbjct: 342 CKHCGAKRFQYEPPSFCCRGGKIKLVQNETPPELMRLWTSSDPDAKHFRDNNRYFNGHFS 401

Query: 183 FTSMGVDFDKDLANGKDGVFSFRARASIYH 272
           FT++GV  DK  AN   GV++FRA   IYH
Sbjct: 402 FTTLGVSLDKAFANMSSGVYTFRAHGQIYH 431


>gb|EEC71179.1| hypothetical protein OsI_03059 [Oryza sativa Indica Group]
          Length = 651

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 41/90 (45%), Positives = 57/90 (63%)
 Frame = +3

Query: 3   CQYCGAKQFIHETSEICCGKGRIKLPRPSAPAELVQLFLDGGDLGKHFRENIRSYNHIFA 182
           C++CGAK+F +E    CC  G+IKL +   P EL++L+       KHFR+N R +N  F+
Sbjct: 285 CKHCGAKRFQYEPPSFCCRGGKIKLVQNETPPELMRLWTSSDPDAKHFRDNNRYFNGHFS 344

Query: 183 FTSMGVDFDKDLANGKDGVFSFRARASIYH 272
           FT++GV  DK  AN   GV++FRA   IYH
Sbjct: 345 FTTLGVSLDKAFANMSSGVYTFRAHGQIYH 374


>gb|AAM92800.1| putative DNA helicase homolog [Oryza sativa Japonica Group]
          Length = 1443

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 40/90 (44%), Positives = 58/90 (64%)
 Frame = +3

Query: 3   CQYCGAKQFIHETSEICCGKGRIKLPRPSAPAELVQLFLDGGDLGKHFRENIRSYNHIFA 182
           C++CGAK+F +ET+  CC  G+IKL     P EL++L+        HFR+NIR +N  F+
Sbjct: 80  CKHCGAKKFQYETNGFCCRGGKIKLSNLETPPELMRLWSSMDSDATHFRDNIRFFNGHFS 139

Query: 183 FTSMGVDFDKDLANGKDGVFSFRARASIYH 272
           FT++GV  D+   N + GV++FRA   IYH
Sbjct: 140 FTTLGVSLDERYTNMRSGVYTFRAHGQIYH 169


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