BLASTX nr result

ID: Coptis23_contig00041609 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041609
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302925.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11
ref|XP_002305225.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10
ref|XP_002533472.1| ATRAD3, putative [Ricinus communis] gi|22352...    70   2e-10
ref|XP_002263360.1| PREDICTED: probable methyltransferase PMT8 [...    67   1e-09
gb|ABR17484.1| unknown [Picea sitchensis]                              67   2e-09

>ref|XP_002302925.1| predicted protein [Populus trichocarpa] gi|222844651|gb|EEE82198.1|
           predicted protein [Populus trichocarpa]
          Length = 322

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 34/41 (82%), Positives = 37/41 (90%)
 Frame = -3

Query: 375 DVYVPLIEGIGFTKVKWVVGRKLDRGAELGEMYISALLEKP 253
           DVY PLIE IGF K+KWVVG+KLDRGAEL EMY+SALLEKP
Sbjct: 281 DVYKPLIESIGFIKLKWVVGKKLDRGAELREMYLSALLEKP 321


>ref|XP_002305225.1| predicted protein [Populus trichocarpa] gi|222848189|gb|EEE85736.1|
           predicted protein [Populus trichocarpa]
          Length = 399

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 33/41 (80%), Positives = 37/41 (90%)
 Frame = -3

Query: 375 DVYVPLIEGIGFTKVKWVVGRKLDRGAELGEMYISALLEKP 253
           DVY PLIE IGF K+KWVVG+KLDRGAEL EMY++ALLEKP
Sbjct: 354 DVYKPLIETIGFIKLKWVVGKKLDRGAELREMYLTALLEKP 394


>ref|XP_002533472.1| ATRAD3, putative [Ricinus communis] gi|223526665|gb|EEF28904.1|
           ATRAD3, putative [Ricinus communis]
          Length = 400

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 32/40 (80%), Positives = 35/40 (87%)
 Frame = -3

Query: 372 VYVPLIEGIGFTKVKWVVGRKLDRGAELGEMYISALLEKP 253
           VY P+IE IGF K+KWVVGRKLDRG EL EMY+SALLEKP
Sbjct: 356 VYAPVIESIGFNKLKWVVGRKLDRGPELREMYLSALLEKP 395


>ref|XP_002263360.1| PREDICTED: probable methyltransferase PMT8 [Vitis vinifera]
           gi|147861796|emb|CAN83179.1| hypothetical protein
           VITISV_013308 [Vitis vinifera]
          Length = 392

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 30/41 (73%), Positives = 36/41 (87%)
 Frame = -3

Query: 375 DVYVPLIEGIGFTKVKWVVGRKLDRGAELGEMYISALLEKP 253
           +VY PLIE +GF K+KWVVG+KLDRG +L EMY+SALLEKP
Sbjct: 347 EVYKPLIESVGFKKLKWVVGKKLDRGPKLREMYLSALLEKP 387


>gb|ABR17484.1| unknown [Picea sitchensis]
          Length = 448

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 29/40 (72%), Positives = 34/40 (85%)
 Frame = -3

Query: 372 VYVPLIEGIGFTKVKWVVGRKLDRGAELGEMYISALLEKP 253
           +YVP+IE +GF K+KW +GRKLDRG  L EMYISALLEKP
Sbjct: 405 IYVPMIENVGFNKLKWSIGRKLDRGPALKEMYISALLEKP 444


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