BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041607
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containi...   120   2e-25
ref|XP_002532248.1| pentatricopeptide repeat-containing protein,...   120   2e-25
emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]   120   2e-25
ref|XP_002301082.1| predicted protein [Populus trichocarpa] gi|2...   115   5e-24
ref|XP_003602939.1| Pentatricopeptide repeat-containing protein ...   112   2e-23

>ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18475-like [Vitis vinifera]
          Length = 513

 Score =  120 bits (300), Expect = 2e-25
 Identities = 53/75 (70%), Positives = 69/75 (92%)
 Frame = -1

Query: 225 KKPKFITHDSAITLIKREKEPQRALDIFNMVSNQRGFNHNHSTYSIILHELAQSKKFKAV 46
           KKPKFI+H+SAI LIKRE +PQRAL+IFN V+ QRGF+HN++TY+ ILH+LA+SKKF+A+
Sbjct: 53  KKPKFISHESAINLIKRETDPQRALEIFNRVAEQRGFSHNNATYATILHKLAKSKKFQAI 112

Query: 45  DAILRQMSFETCKFH 1
           DA+L QM++ETCKFH
Sbjct: 113 DAVLHQMTYETCKFH 127


>ref|XP_002532248.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528066|gb|EEF30142.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 521

 Score =  120 bits (300), Expect = 2e-25
 Identities = 53/75 (70%), Positives = 67/75 (89%)
 Frame = -1

Query: 225 KKPKFITHDSAITLIKREKEPQRALDIFNMVSNQRGFNHNHSTYSIILHELAQSKKFKAV 46
           +K KFI+H+SAI LIKREK+PQ AL+IFNMV  Q+GFNHNH+TYS ++H+LAQ+KKF AV
Sbjct: 52  RKCKFISHESAINLIKREKDPQHALEIFNMVGEQKGFNHNHATYSTLIHKLAQTKKFHAV 111

Query: 45  DAILRQMSFETCKFH 1
           DA+L QM++ETCKFH
Sbjct: 112 DALLHQMTYETCKFH 126


>emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]
          Length = 714

 Score =  120 bits (300), Expect = 2e-25
 Identities = 53/75 (70%), Positives = 69/75 (92%)
 Frame = -1

Query: 225 KKPKFITHDSAITLIKREKEPQRALDIFNMVSNQRGFNHNHSTYSIILHELAQSKKFKAV 46
           KKPKFI+H+SAI LIKRE +PQRAL+IFN V+ QRGF+HN++TY+ ILH+LA+SKKF+A+
Sbjct: 123 KKPKFISHESAINLIKRETDPQRALEIFNRVAEQRGFSHNNATYATILHKLAKSKKFQAI 182

Query: 45  DAILRQMSFETCKFH 1
           DA+L QM++ETCKFH
Sbjct: 183 DAVLHQMTYETCKFH 197


>ref|XP_002301082.1| predicted protein [Populus trichocarpa] gi|222842808|gb|EEE80355.1|
           predicted protein [Populus trichocarpa]
          Length = 509

 Score =  115 bits (287), Expect = 5e-24
 Identities = 49/75 (65%), Positives = 67/75 (89%)
 Frame = -1

Query: 225 KKPKFITHDSAITLIKREKEPQRALDIFNMVSNQRGFNHNHSTYSIILHELAQSKKFKAV 46
           +KPKFI+H++A+ LIK E++PQ AL+IFN+V  Q+GFNHNH+TYS I+ +LA++KKF+AV
Sbjct: 43  RKPKFISHETAVNLIKHERDPQHALEIFNLVVEQKGFNHNHATYSTIIDKLARAKKFQAV 102

Query: 45  DAILRQMSFETCKFH 1
           DA+LRQM +ETCKFH
Sbjct: 103 DALLRQMMYETCKFH 117


>ref|XP_003602939.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355491987|gb|AES73190.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 586

 Score =  112 bits (281), Expect = 2e-23
 Identities = 52/75 (69%), Positives = 63/75 (84%)
 Frame = -1

Query: 225 KKPKFITHDSAITLIKREKEPQRALDIFNMVSNQRGFNHNHSTYSIILHELAQSKKFKAV 46
           KK K+ITHD AI LIKREK+PQ AL IFNMVS Q+GFNHN++TY+ IL +LAQ KKF+AV
Sbjct: 126 KKSKYITHDVAINLIKREKDPQHALKIFNMVSEQKGFNHNNATYATILQKLAQFKKFQAV 185

Query: 45  DAILRQMSFETCKFH 1
           D +L QM++E CKFH
Sbjct: 186 DRVLHQMTYEACKFH 200