BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041582
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX95129.1| retrotransposon protein, putative, unclassified [...    64   2e-08
gb|EEE51789.1| hypothetical protein OsJ_33245 [Oryza sativa Japo...    64   2e-08
gb|ABA91837.2| retrotransposon protein, putative, unclassified [...    64   2e-08
emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulga...    62   6e-08
gb|EEE51862.1| hypothetical protein OsJ_33393 [Oryza sativa Japo...    59   4e-07

>gb|AAX95129.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group] gi|62733115|gb|AAX95232.1|
            retrotransposon protein, putative, unclassified [Oryza
            sativa Japonica Group]
          Length = 1324

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/54 (55%), Positives = 41/54 (75%)
 Frame = +1

Query: 235  WNHTNITLIPKIPNLNQVKNFRHISLCNSISWRIISTILANRLKPSLVKIISPL 396
            WN T + LIPK+PN  ++K+ R ISLCN + ++I S +LANRLKP L +IISP+
Sbjct: 941  WNDTVVVLIPKVPNPERIKDLRPISLCN-VVYKIASKVLANRLKPLLSEIISPI 993


>gb|EEE51789.1| hypothetical protein OsJ_33245 [Oryza sativa Japonica Group]
          Length = 825

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/54 (55%), Positives = 41/54 (75%)
 Frame = +1

Query: 235 WNHTNITLIPKIPNLNQVKNFRHISLCNSISWRIISTILANRLKPSLVKIISPL 396
           WN T + LIPK+PN  ++K+ R ISLCN + ++I S +LANRLKP L +IISP+
Sbjct: 442 WNDTVVVLIPKVPNPERIKDLRPISLCN-VVYKIASKVLANRLKPLLSEIISPI 494


>gb|ABA91837.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1301

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/54 (55%), Positives = 41/54 (75%)
 Frame = +1

Query: 235  WNHTNITLIPKIPNLNQVKNFRHISLCNSISWRIISTILANRLKPSLVKIISPL 396
            WN T + LIPK+PN  ++K+ R ISLCN + ++I S +LANRLKP L +IISP+
Sbjct: 918  WNDTVVVLIPKVPNPERIKDLRPISLCN-VVYKIASKVLANRLKPLLSEIISPI 970


>emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1365

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 34/67 (50%), Positives = 41/67 (61%)
 Frame = +1

Query: 193 THIFCLSY*FFASFWNHTNITLIPKIPNLNQVKNFRHISLCNSISWRIISTILANRLKPS 372
           +H F   Y      WN TNI LIPK+    Q   FR ISLCN I ++IIS I+ANRLKP 
Sbjct: 485 SHFFTTGY--ILQEWNQTNICLIPKVERPEQACQFRPISLCNVI-YKIISKIIANRLKPI 541

Query: 373 LVKIISP 393
           L  I++P
Sbjct: 542 LKSIVTP 548


>gb|EEE51862.1| hypothetical protein OsJ_33393 [Oryza sativa Japonica Group]
          Length = 662

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/53 (52%), Positives = 38/53 (71%)
 Frame = +1

Query: 235 WNHTNITLIPKIPNLNQVKNFRHISLCNSISWRIISTILANRLKPSLVKIISP 393
           WN T I LIPK+P    +K+ R ISLCN + ++I+S +LANRLK  L ++ISP
Sbjct: 178 WNETIIVLIPKVPKPENIKDLRPISLCN-VLYKIVSKVLANRLKTILPEVISP 229