BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041570
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35966.3| unnamed protein product [Vitis vinifera]               89   4e-16
ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containi...    82   6e-14
emb|CBI30729.3| unnamed protein product [Vitis vinifera]               82   6e-14
ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...    78   8e-13
ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat...    78   8e-13

>emb|CBI35966.3| unnamed protein product [Vitis vinifera]
          Length = 624

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 42/83 (50%), Positives = 56/83 (67%), Gaps = 3/83 (3%)
 Frame = -1

Query: 263 SSYLWNVLIKGYSRSSFPEQGLITYVKMLRSLTRPDNYTHPFVLK---TVGSIWEGMQVH 93
           + + WN LI+ Y+    P+  L  Y+KMLRS T+P N+T PFVLK   T+GS+ EG Q+H
Sbjct: 57  TDFSWNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIH 116

Query: 92  GHVFRNGFVDNVFVVNTLISMYC 24
            HV R GF  ++FV N+LI MYC
Sbjct: 117 THVLRLGFGSDLFVCNSLIDMYC 139


>ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g18840-like [Vitis vinifera]
          Length = 536

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 39/88 (44%), Positives = 55/88 (62%), Gaps = 5/88 (5%)
 Frame = -1

Query: 269 NSSSYLWNVLIKGYSRSSFPEQGLITYVKMLRSLTRPDNYTHPFVLKTVGS---IWEGMQ 99
           N +SY+WN +I+ Y+ S  PE  L  + +ML +   PD YT  F LK+ GS   + EG Q
Sbjct: 70  NPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGVEEGRQ 129

Query: 98  VHGHVFRNGFVDNVFVVNTLISMY--CG 21
           +HGHV + G  D++F+ NTLI +Y  CG
Sbjct: 130 IHGHVLKTGLGDDLFIQNTLIHLYASCG 157


>emb|CBI30729.3| unnamed protein product [Vitis vinifera]
          Length = 506

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 39/88 (44%), Positives = 55/88 (62%), Gaps = 5/88 (5%)
 Frame = -1

Query: 269 NSSSYLWNVLIKGYSRSSFPEQGLITYVKMLRSLTRPDNYTHPFVLKTVGS---IWEGMQ 99
           N +SY+WN +I+ Y+ S  PE  L  + +ML +   PD YT  F LK+ GS   + EG Q
Sbjct: 70  NPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGVEEGRQ 129

Query: 98  VHGHVFRNGFVDNVFVVNTLISMY--CG 21
           +HGHV + G  D++F+ NTLI +Y  CG
Sbjct: 130 IHGHVLKTGLGDDLFIQNTLIHLYASCG 157


>ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g15930-like [Cucumis
           sativus]
          Length = 744

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 40/91 (43%), Positives = 56/91 (61%), Gaps = 5/91 (5%)
 Frame = -1

Query: 278 EPNNSSSYLWNVLIKGYSRSSFPEQGLITYVKMLRSLTRPDNYTHPFVLKTVG---SIWE 108
           EPN    ++WN +I+GYSR  FP+ G+  Y++MLR   +PD YT PF+ K      ++  
Sbjct: 101 EPN---LFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEY 157

Query: 107 GMQVHGHVFRNGFVDNVFVVNTLISMY--CG 21
           G Q+HGHV ++G   NVFV   L+ MY  CG
Sbjct: 158 GRQLHGHVLKHGLQYNVFVHTALVQMYLLCG 188


>ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Cucumis sativus]
          Length = 723

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 40/91 (43%), Positives = 56/91 (61%), Gaps = 5/91 (5%)
 Frame = -1

Query: 278 EPNNSSSYLWNVLIKGYSRSSFPEQGLITYVKMLRSLTRPDNYTHPFVLKTVG---SIWE 108
           EPN    ++WN +I+GYSR  FP+ G+  Y++MLR   +PD YT PF+ K      ++  
Sbjct: 80  EPN---LFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEY 136

Query: 107 GMQVHGHVFRNGFVDNVFVVNTLISMY--CG 21
           G Q+HGHV ++G   NVFV   L+ MY  CG
Sbjct: 137 GRQLHGHVLKHGLQYNVFVHTALVQMYLLCG 167