BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041560
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320672.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27
ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   110   2e-22
ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containi...   110   2e-22
ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containi...   108   6e-22
emb|CBI29560.3| unnamed protein product [Vitis vinifera]              108   6e-22

>ref|XP_002320672.1| predicted protein [Populus trichocarpa] gi|222861445|gb|EEE98987.1|
           predicted protein [Populus trichocarpa]
          Length = 720

 Score =  126 bits (316), Expect = 2e-27
 Identities = 56/90 (62%), Positives = 74/90 (82%)
 Frame = -2

Query: 273 NHFIILYAKCRLIASARNAFDYTYHPNVFTYNTMIAAYVKESQMDIARHLFDQIPSPDIV 94
           NHFI+LY+KC L+ +A +AF+ T+ PNVF++N +IAAY KES + +A HLFDQIP PD+V
Sbjct: 47  NHFILLYSKCNLLTTAHHAFNQTHEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLV 106

Query: 93  SWNILVSGYADRGDTLSAFNLFTQMRVMGL 4
           S+N L++ YADRGDTLSA +LF +MR MGL
Sbjct: 107 SFNTLINAYADRGDTLSALSLFGEMREMGL 136


>ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  110 bits (274), Expect = 2e-22
 Identities = 47/86 (54%), Positives = 68/86 (79%)
 Frame = -2

Query: 273 NHFIILYAKCRLIASARNAFDYTYHPNVFTYNTMIAAYVKESQMDIARHLFDQIPSPDIV 94
           NHF++LY+KCR +++AR  FD+T+  NVF++NT+I+AY KES +++A  LFD++P PD V
Sbjct: 47  NHFLLLYSKCRRLSAARRVFDHTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSV 106

Query: 93  SWNILVSGYADRGDTLSAFNLFTQMR 16
           S+N L++ YA RGDT  AF LF +MR
Sbjct: 107 SYNTLIAAYARRGDTQPAFQLFLEMR 132


>ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  110 bits (274), Expect = 2e-22
 Identities = 47/86 (54%), Positives = 68/86 (79%)
 Frame = -2

Query: 273 NHFIILYAKCRLIASARNAFDYTYHPNVFTYNTMIAAYVKESQMDIARHLFDQIPSPDIV 94
           NHF++LY+KCR +++AR  FD+T+  NVF++NT+I+AY KES +++A  LFD++P PD V
Sbjct: 47  NHFLLLYSKCRRLSAARRVFDHTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSV 106

Query: 93  SWNILVSGYADRGDTLSAFNLFTQMR 16
           S+N L++ YA RGDT  AF LF +MR
Sbjct: 107 SYNTLIAAYARRGDTQPAFQLFLEMR 132


>ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Vitis vinifera]
          Length = 719

 Score =  108 bits (269), Expect = 6e-22
 Identities = 53/91 (58%), Positives = 66/91 (72%)
 Frame = -2

Query: 273 NHFIILYAKCRLIASARNAFDYTYHPNVFTYNTMIAAYVKESQMDIARHLFDQIPSPDIV 94
           NHFI+LY+KC  +A AR AF     PNVF++N +IAAY KES+  IA  LFDQIP PD+V
Sbjct: 47  NHFILLYSKCGRLAWARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLV 106

Query: 93  SWNILVSGYADRGDTLSAFNLFTQMRVMGLE 1
           S+N L+S YAD G+T  A  LF+ MR MGL+
Sbjct: 107 SYNTLISAYADCGETAPALGLFSGMREMGLD 137


>emb|CBI29560.3| unnamed protein product [Vitis vinifera]
          Length = 640

 Score =  108 bits (269), Expect = 6e-22
 Identities = 53/91 (58%), Positives = 66/91 (72%)
 Frame = -2

Query: 273 NHFIILYAKCRLIASARNAFDYTYHPNVFTYNTMIAAYVKESQMDIARHLFDQIPSPDIV 94
           NHFI+LY+KC  +A AR AF     PNVF++N +IAAY KES+  IA  LFDQIP PD+V
Sbjct: 47  NHFILLYSKCGRLAWARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLV 106

Query: 93  SWNILVSGYADRGDTLSAFNLFTQMRVMGLE 1
           S+N L+S YAD G+T  A  LF+ MR MGL+
Sbjct: 107 SYNTLISAYADCGETAPALGLFSGMREMGLD 137