BLASTX nr result

ID: Coptis23_contig00041556 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041556
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142449.1| PREDICTED: uncharacterized protein LOC101212...    85   5e-15
ref|XP_003555466.1| PREDICTED: uncharacterized protein LOC100790...    80   2e-13
ref|XP_002262646.1| PREDICTED: uncharacterized protein LOC100242...    79   3e-13
ref|XP_003536299.1| PREDICTED: uncharacterized protein LOC100789...    76   3e-12
ref|XP_001778644.1| predicted protein [Physcomitrella patens sub...    74   1e-11

>ref|XP_004142449.1| PREDICTED: uncharacterized protein LOC101212638 [Cucumis sativus]
           gi|449513220|ref|XP_004164265.1| PREDICTED:
           uncharacterized LOC101212638 [Cucumis sativus]
          Length = 783

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 46/99 (46%), Positives = 59/99 (59%), Gaps = 4/99 (4%)
 Frame = -1

Query: 285 MGSSSSFCNMTSCFKCWFRWRRAHCFL-SATPXXXXXXXXXXXXXSTLYAWLSFSHYELR 109
           +G        TS + C ++W++ H  L S+               +TLYAWL+F+   +R
Sbjct: 31  VGGGGGVNGSTSSYGCGWKWQQRHIRLVSSGFVFFFGCFVLFGSIATLYAWLAFTPQYVR 90

Query: 108 P---ASSLGCKEDNEGSWSIGVFYGDSPFTLKPIESKNV 1
                SSLGC+EDNEGSWSIGVFYGDSPF+LKPIE  NV
Sbjct: 91  TIGGVSSLGCQEDNEGSWSIGVFYGDSPFSLKPIEDANV 129


>ref|XP_003555466.1| PREDICTED: uncharacterized protein LOC100790409 [Glycine max]
          Length = 761

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 44/99 (44%), Positives = 56/99 (56%), Gaps = 5/99 (5%)
 Frame = -1

Query: 282 GSSSSFCNMTSCFKCWFRWRRAHC-----FLSATPXXXXXXXXXXXXXSTLYAWLSFSHY 118
           G+  S C+M+   KC  RWR  +        S+               +TLY WL+FS  
Sbjct: 10  GNGGSCCDMS--VKCSCRWRLENQQYYKRLFSSGFVFFFGCFVLFGSIATLYGWLAFSPT 67

Query: 117 ELRPASSLGCKEDNEGSWSIGVFYGDSPFTLKPIESKNV 1
                SS GC++DNEGSWS+GVFYGDSPF+LKPIE+ NV
Sbjct: 68  VHTSLSSFGCRDDNEGSWSVGVFYGDSPFSLKPIEAANV 106


>ref|XP_002262646.1| PREDICTED: uncharacterized protein LOC100242107 [Vitis vinifera]
           gi|296090371|emb|CBI40190.3| unnamed protein product
           [Vitis vinifera]
          Length = 756

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 42/95 (44%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
 Frame = -1

Query: 282 GSSSSFCNMTSCFKCWFRWR-RAHCFLSATPXXXXXXXXXXXXXSTLYAWLSFSHYELRP 106
           G ++S C+M        RWR   HCFLS+T              + +YAWL  + +    
Sbjct: 15  GGTTSCCHMA-------RWRWDHHCFLSSTFVFFIASFVVYGFIAGVYAWLFVNPHAPLE 67

Query: 105 ASSLGCKEDNEGSWSIGVFYGDSPFTLKPIESKNV 1
            +SLGC+ D+EGSW+IGVFYGDSPF+L+PIE+ NV
Sbjct: 68  LASLGCRPDSEGSWAIGVFYGDSPFSLRPIEAMNV 102


>ref|XP_003536299.1| PREDICTED: uncharacterized protein LOC100789310 [Glycine max]
          Length = 768

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 37/53 (69%), Positives = 42/53 (79%), Gaps = 3/53 (5%)
 Frame = -1

Query: 150 TLYAWLSFS---HYELRPASSLGCKEDNEGSWSIGVFYGDSPFTLKPIESKNV 1
           TLY W +FS   H  L  +SS GC+EDNEGSWSIGVFYGDSPF+LKPIE+ NV
Sbjct: 63  TLYGWFAFSPTVHTAL--SSSFGCREDNEGSWSIGVFYGDSPFSLKPIEAANV 113


>ref|XP_001778644.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162669962|gb|EDQ56539.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 751

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 36/83 (43%), Positives = 48/83 (57%)
 Frame = -1

Query: 249 CFKCWFRWRRAHCFLSATPXXXXXXXXXXXXXSTLYAWLSFSHYELRPASSLGCKEDNEG 70
           C KC  R +   C LS                 +L+AWL+FS Y+    ++ GC+ DNEG
Sbjct: 17  CSKCHDRLQHRGCGLSLAFLYFFWTTLFFVFVGSLFAWLAFSPYKRHIGAAAGCQPDNEG 76

Query: 69  SWSIGVFYGDSPFTLKPIESKNV 1
           SWSIGV+ G+SPF L+PIES N+
Sbjct: 77  SWSIGVYRGNSPFNLQPIESANI 99


Top