BLASTX nr result

ID: Coptis23_contig00041545 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041545
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518029.1| PREDICTED: uncharacterized protein LOC100803...    69   4e-10
ref|XP_002518022.1| hypothetical protein RCOM_1176900 [Ricinus c...    69   5e-10
ref|XP_002267524.1| PREDICTED: putative nuclease HARBI1-like [Vi...    68   7e-10
ref|XP_003522292.1| PREDICTED: putative nuclease HARBI1-like [Gl...    65   6e-09
ref|XP_003553142.1| PREDICTED: putative nuclease HARBI1-like [Gl...    64   1e-08

>ref|XP_003518029.1| PREDICTED: uncharacterized protein LOC100803756 [Glycine max]
          Length = 409

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/76 (44%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
 Frame = -3

Query: 248 K*PCNDSMLSGGAYMNEVLEGHNDRCRRMFRMDKPVFVKFCKILKDKELLQDSFTISVRE 69
           K PC DS ++G  +++E+L GH  RC +MFRM K VF++ C IL+ K  L+ +  +S+ E
Sbjct: 48  KNPCRDSSMTGHRWVSEILNGHPIRCYQMFRMKKLVFLELCDILETKYNLKKTRNVSIYE 107

Query: 68  QVRMFLYTMY--GSLC 27
           QV +FLY +   GS+C
Sbjct: 108 QVGLFLYMLSQPGSVC 123


>ref|XP_002518022.1| hypothetical protein RCOM_1176900 [Ricinus communis]
           gi|223543004|gb|EEF44540.1| hypothetical protein
           RCOM_1176900 [Ricinus communis]
          Length = 354

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 31/64 (48%), Positives = 43/64 (67%)
 Frame = -3

Query: 242 PCNDSMLSGGAYMNEVLEGHNDRCRRMFRMDKPVFVKFCKILKDKELLQDSFTISVREQV 63
           P   S  SG  +MNEVL+GH+D CR MFRMDK VF K C  L+ + +L+D+  + + EQ+
Sbjct: 173 PRCSSSPSGSGFMNEVLDGHDDLCREMFRMDKCVFYKLCNTLRQRGMLRDTAGVMIEEQL 232

Query: 62  RMFL 51
            +FL
Sbjct: 233 AIFL 236


>ref|XP_002267524.1| PREDICTED: putative nuclease HARBI1-like [Vitis vinifera]
          Length = 391

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 30/64 (46%), Positives = 42/64 (65%)
 Frame = -3

Query: 242 PCNDSMLSGGAYMNEVLEGHNDRCRRMFRMDKPVFVKFCKILKDKELLQDSFTISVREQV 63
           PC+    SG  +M EVL GH+D CR MFRMDK VF K C  L+ + +L+D+  + + EQ+
Sbjct: 30  PCHSLSPSGSGFMTEVLNGHDDVCREMFRMDKHVFHKLCDTLRQRGMLRDTAGVMIEEQL 89

Query: 62  RMFL 51
            +FL
Sbjct: 90  AIFL 93


>ref|XP_003522292.1| PREDICTED: putative nuclease HARBI1-like [Glycine max]
          Length = 401

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 30/69 (43%), Positives = 47/69 (68%)
 Frame = -3

Query: 248 K*PCNDSMLSGGAYMNEVLEGHNDRCRRMFRMDKPVFVKFCKILKDKELLQDSFTISVRE 69
           K PC +S ++G  +++E+L GH  RC +MFRM K VF++ C IL+ K  L+ +  +S+ E
Sbjct: 48  KNPCRNSSMTGHCWVSEILNGHLIRCYQMFRMKKLVFLELCDILETKYNLKKTRNVSIYE 107

Query: 68  QVRMFLYTM 42
           QV +FLY +
Sbjct: 108 QVGLFLYML 116


>ref|XP_003553142.1| PREDICTED: putative nuclease HARBI1-like [Glycine max]
          Length = 379

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 30/69 (43%), Positives = 46/69 (66%)
 Frame = -3

Query: 248 K*PCNDSMLSGGAYMNEVLEGHNDRCRRMFRMDKPVFVKFCKILKDKELLQDSFTISVRE 69
           K PC DS + G  +++++L GH  RC +MFRM K VF++ C IL+ K  L+ +  +S+ E
Sbjct: 41  KNPCRDSSMIGHRWISKILNGHPIRCYQMFRMKKLVFLELCDILETKYNLKKTRNVSIYE 100

Query: 68  QVRMFLYTM 42
           QV +FLY +
Sbjct: 101 QVGLFLYML 109


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