BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041513
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD96948.1| hypothetical protein [Cleome spinosa]                   96   4e-18
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]                95   7e-18
gb|AAD22330.1| putative non-LTR retroelement reverse transcripta...    93   3e-17
emb|CAB72467.1| putative protein [Arabidopsis thaliana]                91   8e-17
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li...    90   2e-16

>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
          Length = 539

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 39/82 (47%), Positives = 60/82 (73%)
 Frame = -3

Query: 256 IHNMLVKLNFPPKMLSWIELCIKTPHFSLLINGSIEGYFQGKRGLRQGDPLSPYLFVIVM 77
           I  ++  LN P   ++W+++C++TP FS+ ING + GYF+G+RGLRQGDPLSPYLF++ M
Sbjct: 59  ITKIMQALNLPRTFVTWVKVCMETPKFSVSINGELAGYFKGRRGLRQGDPLSPYLFIMSM 118

Query: 76  EIMGNLLTQGMDMNSIKLHPKC 11
           E++  +L +    + + LHPKC
Sbjct: 119 EVLSRMLDRCAAESRLSLHPKC 140


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 41/83 (49%), Positives = 55/83 (66%)
 Frame = -3

Query: 250 NMLVKLNFPPKMLSWIELCIKTPHFSLLINGSIEGYFQGKRGLRQGDPLSPYLFVIVMEI 71
           N LV +NF P  + WI LCI T  FS+ +NG + GYFQ KRGLRQG  LSPYLFVI M++
Sbjct: 261 NTLVAMNFSPTFIHWINLCITTASFSVQVNGDLVGYFQSKRGLRQGCSLSPYLFVICMDV 320

Query: 70  MGNLLTQGMDMNSIKLHPKCKKI 2
           +  +L +   +     HPKC+++
Sbjct: 321 LSKMLDKAAGVRKFGFHPKCQRL 343


>gb|AAD22330.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 631

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 42/83 (50%), Positives = 56/83 (67%)
 Frame = -3

Query: 250 NMLVKLNFPPKMLSWIELCIKTPHFSLLINGSIEGYFQGKRGLRQGDPLSPYLFVIVMEI 71
           N L  LNFP K+  WI+LCI T  FS+ +NG + G+F  KRGLRQG  LSPYLFVI M +
Sbjct: 184 NTLEALNFPEKIRHWIKLCISTATFSVQVNGELAGFFGNKRGLRQGCALSPYLFVICMNV 243

Query: 70  MGNLLTQGMDMNSIKLHPKCKKI 2
           + +++ +     +I  HPKCKK+
Sbjct: 244 LSHMIDEAAVRRNIGYHPKCKKL 266


>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
          Length = 762

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 40/83 (48%), Positives = 55/83 (66%)
 Frame = -3

Query: 250 NMLVKLNFPPKMLSWIELCIKTPHFSLLINGSIEGYFQGKRGLRQGDPLSPYLFVIVMEI 71
           N L  ++FP   + WI LCI TP FS+ +NG + G+FQ  RGLRQG  LSPYLFVI M++
Sbjct: 167 NTLTAMHFPEMFIHWIRLCITTPSFSVQVNGELAGFFQSSRGLRQGCALSPYLFVICMDV 226

Query: 70  MGNLLTQGMDMNSIKLHPKCKKI 2
           +  LL + + +  I  HP CK++
Sbjct: 227 LSKLLDKVVGIGRIGYHPHCKRM 249


>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 893

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 39/74 (52%), Positives = 51/74 (68%)
 Frame = -3

Query: 235 LNFPPKMLSWIELCIKTPHFSLLINGSIEGYFQGKRGLRQGDPLSPYLFVIVMEIMGNLL 56
           L  P K + WI  CI TP+FS+++NGS  G+F+  +GLRQGDPLSPYLFV+ ME+  +LL
Sbjct: 614 LAVPEKFVCWINQCISTPYFSVMVNGSSSGFFKSNKGLRQGDPLSPYLFVLAMEVFSSLL 673

Query: 55  TQGMDMNSIKLHPK 14
               D   I+ HPK
Sbjct: 674 KARFDAGYIQYHPK 687