BLASTX nr result

ID: Coptis23_contig00041441 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041441
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320281.1| predicted protein [Populus trichocarpa] gi|2...    93   2e-17
ref|XP_002874950.1| hypothetical protein ARALYDRAFT_490383 [Arab...    92   6e-17
ref|XP_003518704.1| PREDICTED: uncharacterized protein LOC100306...    91   7e-17
gb|ACU14559.1| unknown [Glycine max]                                   91   7e-17
gb|AFK46299.1| unknown [Lotus japonicus]                               91   1e-16

>ref|XP_002320281.1| predicted protein [Populus trichocarpa] gi|222861054|gb|EEE98596.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 36/50 (72%), Positives = 46/50 (92%)
 Frame = -2

Query: 306 LFHLWYYPQANIELFGQGIISWTSTCYFVYTPFLISLARWLKTKVTTPTE 157
           LFHLWYYPQANIE+ GQG+++WT+TCYFVYTPFLISL+RWL++ +T P +
Sbjct: 195 LFHLWYYPQANIEILGQGLVTWTTTCYFVYTPFLISLSRWLRSMITPPNK 244


>ref|XP_002874950.1| hypothetical protein ARALYDRAFT_490383 [Arabidopsis lyrata subsp.
           lyrata] gi|297320787|gb|EFH51209.1| hypothetical protein
           ARALYDRAFT_490383 [Arabidopsis lyrata subsp. lyrata]
          Length = 256

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 38/54 (70%), Positives = 49/54 (90%), Gaps = 1/54 (1%)
 Frame = -2

Query: 303 FHLWYYPQANIELFGQGIISWTSTCYFVYTPFLISLARWLKTKV-TTPTEKDLS 145
           FHLWYYP+ANIE+FGQG+++WT+TCYFVYTPFLI+LARWL+T +  T T+ D+S
Sbjct: 198 FHLWYYPEANIEIFGQGLVTWTTTCYFVYTPFLINLARWLRTVMERTTTDVDIS 251


>ref|XP_003518704.1| PREDICTED: uncharacterized protein LOC100306404 [Glycine max]
          Length = 255

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 37/50 (74%), Positives = 44/50 (88%)
 Frame = -2

Query: 306 LFHLWYYPQANIELFGQGIISWTSTCYFVYTPFLISLARWLKTKVTTPTE 157
           LFHLWYYPQANIE+FGQG+++WT TCYFVYTPFLI+L+RWL+T     TE
Sbjct: 203 LFHLWYYPQANIEIFGQGLVTWTLTCYFVYTPFLINLSRWLRTVYAPQTE 252


>gb|ACU14559.1| unknown [Glycine max]
          Length = 253

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 37/50 (74%), Positives = 44/50 (88%)
 Frame = -2

Query: 306 LFHLWYYPQANIELFGQGIISWTSTCYFVYTPFLISLARWLKTKVTTPTE 157
           LFHLWYYPQANIE+FGQG+++WT TCYFVYTPFLI+L+RWL+T     TE
Sbjct: 203 LFHLWYYPQANIEIFGQGLVTWTLTCYFVYTPFLINLSRWLRTVYAPQTE 252


>gb|AFK46299.1| unknown [Lotus japonicus]
          Length = 251

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 37/49 (75%), Positives = 43/49 (87%)
 Frame = -2

Query: 303 FHLWYYPQANIELFGQGIISWTSTCYFVYTPFLISLARWLKTKVTTPTE 157
           FHLWYYPQANIELFGQG+++WT TCYFVYTPFLI+L+RWL+T  T   E
Sbjct: 200 FHLWYYPQANIELFGQGLVTWTLTCYFVYTPFLINLSRWLRTVFTAKIE 248


Top