BLASTX nr result

ID: Coptis23_contig00041415 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041415
         (247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83300.1| hypothetical protein VITISV_044100 [Vitis vinifera]    64   2e-08
emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]    64   2e-08
emb|CAN66607.1| hypothetical protein VITISV_017554 [Vitis vinifera]    62   5e-08
gb|ABD78322.1| polyprotein [Primula vulgaris]                          59   4e-07
emb|CAN76938.1| hypothetical protein VITISV_025425 [Vitis vinifera]    59   4e-07

>emb|CAN83300.1| hypothetical protein VITISV_044100 [Vitis vinifera]
          Length = 1366

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 24/49 (48%), Positives = 38/49 (77%)
 Frame = -3

Query: 155 PIKRLTPAQMKVRKEKGLCYNCEEQYMPGHICKTQSLYMLMGTEEEDGE 9
           P++RL+P+QMK R++KGLCYNC++++ PGH CK+  L+++   E  D E
Sbjct: 240 PVQRLSPSQMKERRDKGLCYNCDDKWAPGHKCKSXRLFIMECDESSDDE 288


>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
          Length = 1469

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 24/49 (48%), Positives = 38/49 (77%)
 Frame = -3

Query: 155 PIKRLTPAQMKVRKEKGLCYNCEEQYMPGHICKTQSLYMLMGTEEEDGE 9
           P++RL+P+QMK R++KGLCYNC++++ PGH CK+  L+++   E  D E
Sbjct: 273 PVQRLSPSQMKERRDKGLCYNCDDKWAPGHKCKSARLFIMECDESSDDE 321


>emb|CAN66607.1| hypothetical protein VITISV_017554 [Vitis vinifera]
          Length = 2822

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 23/47 (48%), Positives = 37/47 (78%)
 Frame = -3

Query: 155 PIKRLTPAQMKVRKEKGLCYNCEEQYMPGHICKTQSLYMLMGTEEED 15
           P++RL+P+QMK R++KGLCYNC++++ PGH CK+  L+++   E  D
Sbjct: 238 PVQRLSPSQMKERRDKGLCYNCDDKWAPGHKCKSARLFIMECDESSD 284


>gb|ABD78322.1| polyprotein [Primula vulgaris]
          Length = 1359

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 24/57 (42%), Positives = 36/57 (63%)
 Frame = -3

Query: 179 TTNTNYSPPIKRLTPAQMKVRKEKGLCYNCEEQYMPGHICKTQSLYMLMGTEEEDGE 9
           TT     PPIKRLT  ++  R++K LCYNC+E++  GH+C    +++L   EE + E
Sbjct: 201 TTAITKLPPIKRLTQDELTDRRQKNLCYNCDEKWFRGHVCVKPKIFLLQNVEEFENE 257


>emb|CAN76938.1| hypothetical protein VITISV_025425 [Vitis vinifera]
          Length = 446

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 24/51 (47%), Positives = 36/51 (70%)
 Frame = -3

Query: 161 SPPIKRLTPAQMKVRKEKGLCYNCEEQYMPGHICKTQSLYMLMGTEEEDGE 9
           +P I+RL+P +MK R++KGLC+NC+E++ PGH CK   L      EE+ G+
Sbjct: 336 TPAIRRLSPTEMKERRDKGLCFNCDEKFAPGHRCKKLFLIEGCWPEEDSGD 386


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