BLASTX nr result

ID: Coptis23_contig00041390 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041390
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75646.1| hypothetical protein VITISV_031269 [Vitis vinifera]    45   3e-07
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...    45   1e-06
emb|CAN76132.1| hypothetical protein VITISV_022809 [Vitis vinifera]    46   3e-06
ref|XP_002489274.1| hypothetical protein SORBIDRAFT_0011s012860 ...    38   4e-06
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...    40   8e-06

>emb|CAN75646.1| hypothetical protein VITISV_031269 [Vitis vinifera]
          Length = 1701

 Score = 45.4 bits (106), Expect(2) = 3e-07
 Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
 Frame = -2

Query: 362 DADNNTKFFHSFAN-FRRRNCIDTIQSRLSSDGNWLTSRPQIAKEFLSAFED 210
           + D NT FFH  AN  RRRNC+    S++  DG WLT   +I +  + AF+D
Sbjct: 844 EGDRNTGFFHKMANSHRRRNCL----SKIKVDGVWLTEEQEIKRGVVRAFKD 891



 Score = 33.5 bits (75), Expect(2) = 3e-07
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = -3

Query: 91   KIRKVVKCMGGHKSPGPNGFSALFYQRYW 5
            ++ K +  + G K+PGP+GF   F+Q YW
Sbjct: 927  EVLKALSDLNGDKAPGPDGFPIRFWQFYW 955


>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 45.1 bits (105), Expect(2) = 1e-06
 Identities = 25/84 (29%), Positives = 43/84 (51%)
 Frame = -2

Query: 368 VLDADNNTKFFHSFANFRRRNCIDTIQSRLSSDGNWLTSRPQIAKEFLSAFEDVFRPAHI 189
           V D D NTK+FH  A+ R++   + ++      G W      I   F S F  +F  ++ 
Sbjct: 347 VKDGDKNTKYFHHKASQRKKR--NFVKGLFDGLGTWREEADHIENIFTSYFSSIFTSSNP 404

Query: 188 PDLPASLNSILNLFEPCISEIENV 117
            DL  SL +++++ EP ++E  N+
Sbjct: 405 SDL--SLEAVMSVIEPVVTEEHNL 426



 Score = 32.0 bits (71), Expect(2) = 1e-06
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = -3

Query: 55  KSPGPNGFSALFYQRYW 5
           K+PGP+G   +FYQR+W
Sbjct: 448 KAPGPDGMHVIFYQRFW 464


>emb|CAN76132.1| hypothetical protein VITISV_022809 [Vitis vinifera]
          Length = 2404

 Score = 46.2 bits (108), Expect(2) = 3e-06
 Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
 Frame = -2

Query: 362  DADNNTKFFHSFAN-FRRRNCIDTIQSRLSSDGNWLTSRPQIAKEFLSAFED 210
            + D NT FFH  AN  RRRNC+    S++  DG WLT   +I +  + AF+D
Sbjct: 1516 EGDRNTGFFHKMANSHRRRNCL----SKIKVDGXWLTEEXEIKRGVVRAFKD 1563



 Score = 29.6 bits (65), Expect(2) = 3e-06
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -3

Query: 91   KIRKVVKCMGGHKSPGPNGFSALFYQRYW 5
            ++ K +  + G K+PGP+GF   F+Q  W
Sbjct: 1599 EVFKALSDLNGDKAPGPDGFPLRFWQFCW 1627


>ref|XP_002489274.1| hypothetical protein SORBIDRAFT_0011s012860 [Sorghum bicolor]
           gi|241947023|gb|EES20168.1| hypothetical protein
           SORBIDRAFT_0011s012860 [Sorghum bicolor]
          Length = 615

 Score = 37.7 bits (86), Expect(2) = 4e-06
 Identities = 20/58 (34%), Positives = 32/58 (55%)
 Frame = -2

Query: 368 VLDADNNTKFFHSFANFRRRNCIDTIQSRLSSDGNWLTSRPQIAKEFLSAFEDVFRPA 195
           +L+ D NT FFH FAN RRR     + S L  D   +  +  I +  +S ++++F P+
Sbjct: 196 LLEGDANTHFFHQFANGRRRK---NMISFLECDSGDIRGQKDITEHIVSFYKNLFGPS 250



 Score = 37.7 bits (86), Expect(2) = 4e-06
 Identities = 14/31 (45%), Positives = 23/31 (74%)
 Frame = -3

Query: 97  ITKIRKVVKCMGGHKSPGPNGFSALFYQRYW 5
           + +I+ VV  M  + +PGPNGFS +F+Q++W
Sbjct: 282 LEEIKGVVMDMKTNSAPGPNGFSVVFFQKFW 312


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score = 40.4 bits (93), Expect(2) = 8e-06
 Identities = 26/85 (30%), Positives = 38/85 (44%)
 Frame = -2

Query: 368 VLDADNNTKFFHSFANFRRRNCIDTIQSRLSSDGNWLTSRPQIAKEFLSAFEDVFRPAHI 189
           + D D NTK+FH  A+ R+R   +TI   L  +G W   R +I       FE +F     
Sbjct: 348 IRDGDKNTKYFHHKASQRKRR--NTINELLDENGVWKKGREEICGVVQHYFEGLF----A 401

Query: 188 PDLPASLNSILNLFEPCISEIENVS 114
            D P ++   L     C+S   N +
Sbjct: 402 TDSPVNMELALEGLSHCVSTDMNTA 426



 Score = 33.9 bits (76), Expect(2) = 8e-06
 Identities = 13/41 (31%), Positives = 26/41 (63%)
 Frame = -3

Query: 127 LKMSLTRCPSITKIRKVVKCMGGHKSPGPNGFSALFYQRYW 5
           +  +L   PS  ++++ +  M  +K+PG +G  ALF+Q++W
Sbjct: 423 MNTALLMLPSGDEVKEALFAMHPNKAPGIDGLHALFFQKFW 463


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