BLASTX nr result

ID: Coptis23_contig00041349 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041349
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67178.1| hypothetical protein VITISV_037456 [Vitis vinifera]   131   5e-29
ref|XP_002278578.1| PREDICTED: uncharacterized protein LOC100261...   130   1e-28
ref|XP_002312533.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28
ref|XP_002517130.1| conserved hypothetical protein [Ricinus comm...   123   1e-26
ref|XP_002314697.1| predicted protein [Populus trichocarpa] gi|2...   122   4e-26

>emb|CAN67178.1| hypothetical protein VITISV_037456 [Vitis vinifera]
          Length = 428

 Score =  131 bits (330), Expect = 5e-29
 Identities = 65/113 (57%), Positives = 80/113 (70%)
 Frame = +1

Query: 1   SQRFFIASPGHSNSIVDSTDSNYLPEPEALIAGGIPIRTHSPNPYIDFRESMVEMVEARE 180
           SQRFF +SPG SNSI ++++S   PE +A++ GG+ + T+SPNPY DFR SM EM EARE
Sbjct: 100 SQRFFFSSPGRSNSIFEASESP--PESDAIVNGGVAVHTYSPNPYEDFRRSMQEMAEARE 157

Query: 181 LFDVRGHWDGLHELLLCYLALNPKDTHKCIIAAFTDVLISLTSKESHPSHRKS 339
           L DV   WD LHELLLCYL LNPK THK II AF D+++ L S  +    R S
Sbjct: 158 LRDVAADWDYLHELLLCYLTLNPKHTHKFIIRAFADLIVCLMSSTASDGRRGS 210


>ref|XP_002278578.1| PREDICTED: uncharacterized protein LOC100261343 [Vitis vinifera]
          Length = 223

 Score =  130 bits (327), Expect = 1e-28
 Identities = 64/113 (56%), Positives = 80/113 (70%)
 Frame = +1

Query: 1   SQRFFIASPGHSNSIVDSTDSNYLPEPEALIAGGIPIRTHSPNPYIDFRESMVEMVEARE 180
           SQRFF +SPG SNSI ++++S   PE ++++ GG+ + T+SPNPY DFR SM EM EARE
Sbjct: 100 SQRFFFSSPGRSNSIFEASESP--PESDSIVNGGVAVHTYSPNPYEDFRRSMQEMAEARE 157

Query: 181 LFDVRGHWDGLHELLLCYLALNPKDTHKCIIAAFTDVLISLTSKESHPSHRKS 339
           L DV   WD LHELLLCYL LNPK THK II AF D+++ L S  +    R S
Sbjct: 158 LRDVAADWDYLHELLLCYLTLNPKHTHKFIIRAFADLIVCLMSSTASDGRRGS 210


>ref|XP_002312533.1| predicted protein [Populus trichocarpa] gi|222852353|gb|EEE89900.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score =  130 bits (326), Expect = 1e-28
 Identities = 63/109 (57%), Positives = 79/109 (72%)
 Frame = +1

Query: 1   SQRFFIASPGHSNSIVDSTDSNYLPEPEALIAGGIPIRTHSPNPYIDFRESMVEMVEARE 180
           SQR F +SPG SNSI++S     LPEP+  ++GG+ I+ +SP+PY DF+ SM EM+EARE
Sbjct: 97  SQRLFFSSPGRSNSIIES-----LPEPQTPVSGGVAIKKYSPDPYTDFKHSMQEMIEARE 151

Query: 181 LFDVRGHWDGLHELLLCYLALNPKDTHKCIIAAFTDVLISLTSKESHPS 327
           L DVR  WD LHELL CYL LNPK THK II+AF D+++ L S  S  S
Sbjct: 152 LRDVRAKWDYLHELLSCYLKLNPKHTHKFIISAFADIVVCLLSSPSQES 200


>ref|XP_002517130.1| conserved hypothetical protein [Ricinus communis]
           gi|223543765|gb|EEF45293.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 230

 Score =  123 bits (309), Expect = 1e-26
 Identities = 59/109 (54%), Positives = 80/109 (73%)
 Frame = +1

Query: 1   SQRFFIASPGHSNSIVDSTDSNYLPEPEALIAGGIPIRTHSPNPYIDFRESMVEMVEARE 180
           SQRFF +SPG SNSI++S ++    EP+  + GG+ ++ +SP+PY DFR+SM+EM+EAR+
Sbjct: 102 SQRFFFSSPGRSNSIIESPETPSA-EPQTPLNGGVAVKKYSPDPYADFRQSMLEMIEARK 160

Query: 181 LFDVRGHWDGLHELLLCYLALNPKDTHKCIIAAFTDVLISLTSKESHPS 327
             DV+  WD LHELL CYL LNPK THK II+AF D++I L +  S  S
Sbjct: 161 PRDVKADWDYLHELLSCYLNLNPKQTHKFIISAFADIVICLLTSSSSES 209


>ref|XP_002314697.1| predicted protein [Populus trichocarpa] gi|222863737|gb|EEF00868.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score =  122 bits (305), Expect = 4e-26
 Identities = 58/106 (54%), Positives = 78/106 (73%)
 Frame = +1

Query: 1   SQRFFIASPGHSNSIVDSTDSNYLPEPEALIAGGIPIRTHSPNPYIDFRESMVEMVEARE 180
           SQRFF +SPG SNSI++S    + P     ++GG+ I+ +S +PYIDF+ SM EM+EARE
Sbjct: 96  SQRFFSSSPGRSNSIIESMQELHTP-----VSGGVAIKKYSLDPYIDFKNSMQEMIEARE 150

Query: 181 LFDVRGHWDGLHELLLCYLALNPKDTHKCIIAAFTDVLISLTSKES 318
           + DVR +WD LHEL+ CYL LNPK+THK II+AF D+++ L S  S
Sbjct: 151 IRDVRANWDYLHELISCYLKLNPKNTHKFIISAFADIIVCLLSSPS 196


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