BLASTX nr result

ID: Coptis23_contig00041332 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041332
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535339.1| PREDICTED: protein ALWAYS EARLY 2-like [Glyc...    96   2e-18
ref|XP_004134200.1| PREDICTED: LOW QUALITY PROTEIN: protein ALWA...    92   4e-17
ref|XP_003591121.1| Lin-9-like protein [Medicago truncatula] gi|...    92   4e-17
ref|XP_004159845.1| PREDICTED: protein ALWAYS EARLY 3-like [Cucu...    91   1e-16
ref|XP_003528649.1| PREDICTED: protein ALWAYS EARLY 3-like [Glyc...    91   1e-16

>ref|XP_003535339.1| PREDICTED: protein ALWAYS EARLY 2-like [Glycine max]
          Length = 1126

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 49/81 (60%), Positives = 60/81 (74%), Gaps = 5/81 (6%)
 Frame = +3

Query: 36  MATKRKSRNLNKLCTKGS-----KDAGNVEKNQKQKRNVSDILGDQWSKEELRRFYEAYR 200
           MA  RKSR++NK  +  +     KD  N  K++++KR ++D LG QWSKEEL RFYEAYR
Sbjct: 1   MAPTRKSRSVNKRMSSSNDNSPEKDGVNSNKSKQRKRKLTDKLGSQWSKEELERFYEAYR 60

Query: 201 KYGKNWKKVAARVRNRSVEMV 263
           KYGK+WKKVAA VRNRS EMV
Sbjct: 61  KYGKDWKKVAAVVRNRSTEMV 81


>ref|XP_004134200.1| PREDICTED: LOW QUALITY PROTEIN: protein ALWAYS EARLY 3-like
           [Cucumis sativus]
          Length = 1161

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 45/81 (55%), Positives = 59/81 (72%), Gaps = 5/81 (6%)
 Frame = +3

Query: 36  MATKRKSRNLNKLCTKG-----SKDAGNVEKNQKQKRNVSDILGDQWSKEELRRFYEAYR 200
           MA  RKSR++NK  +       SK   +  K++++KR  +D+LG QWSK+E+ +FYEAYR
Sbjct: 1   MAPSRKSRSVNKXFSSANEVSSSKHVEDASKSKQKKRKFADLLGPQWSKDEVEQFYEAYR 60

Query: 201 KYGKNWKKVAARVRNRSVEMV 263
           KYGK+WKKVAA VRNRS EMV
Sbjct: 61  KYGKDWKKVAAAVRNRSTEMV 81


>ref|XP_003591121.1| Lin-9-like protein [Medicago truncatula]
           gi|355480169|gb|AES61372.1| Lin-9-like protein [Medicago
           truncatula]
          Length = 1139

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 47/81 (58%), Positives = 58/81 (71%), Gaps = 5/81 (6%)
 Frame = +3

Query: 36  MATKRKSRNLNKLCTKGS-----KDAGNVEKNQKQKRNVSDILGDQWSKEELRRFYEAYR 200
           MA  RKSR++NK     +     KD     KN+++K+ +SD LG QWSK EL RFYEAYR
Sbjct: 1   MAPTRKSRSVNKRFKNSNDISPEKDGVGSSKNKQRKKKLSDKLGSQWSKGELERFYEAYR 60

Query: 201 KYGKNWKKVAARVRNRSVEMV 263
           K+GK+WKKVAA VRNRS+EMV
Sbjct: 61  KHGKDWKKVAAAVRNRSIEMV 81


>ref|XP_004159845.1| PREDICTED: protein ALWAYS EARLY 3-like [Cucumis sativus]
          Length = 1161

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 45/81 (55%), Positives = 59/81 (72%), Gaps = 5/81 (6%)
 Frame = +3

Query: 36  MATKRKSRNLNKLCTKG-----SKDAGNVEKNQKQKRNVSDILGDQWSKEELRRFYEAYR 200
           MA  RKSR++NK  +       SK   +  K++++KR  +D+LG QWSK+E+ +FYEAYR
Sbjct: 1   MAPSRKSRSVNKRFSSANEASSSKYVEDASKSKQKKRKFADLLGPQWSKDEVEQFYEAYR 60

Query: 201 KYGKNWKKVAARVRNRSVEMV 263
           KYGK+WKKVAA VRNRS EMV
Sbjct: 61  KYGKDWKKVAAAVRNRSTEMV 81


>ref|XP_003528649.1| PREDICTED: protein ALWAYS EARLY 3-like [Glycine max]
          Length = 1155

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 47/83 (56%), Positives = 59/83 (71%), Gaps = 7/83 (8%)
 Frame = +3

Query: 36  MATKRKSRNLNKLCTK-----GSKD--AGNVEKNQKQKRNVSDILGDQWSKEELRRFYEA 194
           MA  RKSR++NK  +       SKD  A N  KN+ +KR ++D+LG QW+KEEL  FYEA
Sbjct: 1   MAPSRKSRSVNKRFSTVREAASSKDKIAENASKNRLKKRKLADMLGPQWNKEELEHFYEA 60

Query: 195 YRKYGKNWKKVAARVRNRSVEMV 263
           YRKYG++WKKV   +RNRSVEMV
Sbjct: 61  YRKYGRDWKKVVLAIRNRSVEMV 83


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