BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041293
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137159.1| PREDICTED: splicing factor 3B subunit 1-like...   169   2e-40
gb|AFW70128.1| antigenic determinant of rec-A protein, mRNA isof...   169   2e-40
gb|AFW66534.1| hypothetical protein ZEAMMB73_641784 [Zea mays] g...   169   2e-40
ref|XP_003574558.1| PREDICTED: splicing factor 3B subunit 1 isof...   169   2e-40
ref|XP_003557702.1| PREDICTED: splicing factor 3B subunit 1-like...   169   2e-40

>ref|XP_004137159.1| PREDICTED: splicing factor 3B subunit 1-like [Cucumis sativus]
            gi|449523197|ref|XP_004168610.1| PREDICTED: splicing
            factor 3B subunit 1-like [Cucumis sativus]
          Length = 1262

 Score =  169 bits (428), Expect = 2e-40
 Identities = 83/86 (96%), Positives = 85/86 (98%)
 Frame = -2

Query: 258  KQCQEEQLMGHLGVVLYEHVGEEYPEVLGSILGALKAIVNDIGMTKMTPPIKDLLPRLTP 79
            KQCQEEQLMGHLGVVLYE++GEEYPEVLGSILGALKAIVN IGMTKMTPPIKDLLPRLTP
Sbjct: 921  KQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTP 980

Query: 78   ILKNRHEKVQENCIDLVGRIADRGAE 1
            ILKNRHEKVQENCIDLVGRIADRGAE
Sbjct: 981  ILKNRHEKVQENCIDLVGRIADRGAE 1006


>gb|AFW70128.1| antigenic determinant of rec-A protein, mRNA isoform 1 [Zea mays]
            gi|413935578|gb|AFW70129.1| antigenic determinant of
            rec-A protein, mRNA isoform 2 [Zea mays]
            gi|413935579|gb|AFW70130.1| antigenic determinant of
            rec-A protein, mRNA isoform 3 [Zea mays]
            gi|413935580|gb|AFW70131.1| antigenic determinant of
            rec-A protein, mRNA isoform 4 [Zea mays]
          Length = 1280

 Score =  169 bits (428), Expect = 2e-40
 Identities = 83/86 (96%), Positives = 85/86 (98%)
 Frame = -2

Query: 258  KQCQEEQLMGHLGVVLYEHVGEEYPEVLGSILGALKAIVNDIGMTKMTPPIKDLLPRLTP 79
            KQCQEEQLMGHLGVVLYE++GEEYPEVLGSILGALKAIVN IGMTKMTPPIKDLLPRLTP
Sbjct: 939  KQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTP 998

Query: 78   ILKNRHEKVQENCIDLVGRIADRGAE 1
            ILKNRHEKVQENCIDLVGRIADRGAE
Sbjct: 999  ILKNRHEKVQENCIDLVGRIADRGAE 1024


>gb|AFW66534.1| hypothetical protein ZEAMMB73_641784 [Zea mays]
            gi|413926603|gb|AFW66535.1| hypothetical protein
            ZEAMMB73_641784 [Zea mays]
          Length = 1280

 Score =  169 bits (428), Expect = 2e-40
 Identities = 83/86 (96%), Positives = 85/86 (98%)
 Frame = -2

Query: 258  KQCQEEQLMGHLGVVLYEHVGEEYPEVLGSILGALKAIVNDIGMTKMTPPIKDLLPRLTP 79
            KQCQEEQLMGHLGVVLYE++GEEYPEVLGSILGALKAIVN IGMTKMTPPIKDLLPRLTP
Sbjct: 939  KQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTP 998

Query: 78   ILKNRHEKVQENCIDLVGRIADRGAE 1
            ILKNRHEKVQENCIDLVGRIADRGAE
Sbjct: 999  ILKNRHEKVQENCIDLVGRIADRGAE 1024


>ref|XP_003574558.1| PREDICTED: splicing factor 3B subunit 1 isoform 1 [Brachypodium
            distachyon] gi|357147949|ref|XP_003574559.1| PREDICTED:
            splicing factor 3B subunit 1 isoform 2 [Brachypodium
            distachyon] gi|357147951|ref|XP_003574560.1| PREDICTED:
            splicing factor 3B subunit 1 isoform 3 [Brachypodium
            distachyon]
          Length = 1279

 Score =  169 bits (428), Expect = 2e-40
 Identities = 83/86 (96%), Positives = 85/86 (98%)
 Frame = -2

Query: 258  KQCQEEQLMGHLGVVLYEHVGEEYPEVLGSILGALKAIVNDIGMTKMTPPIKDLLPRLTP 79
            KQCQEEQLMGHLGVVLYE++GEEYPEVLGSILGALKAIVN IGMTKMTPPIKDLLPRLTP
Sbjct: 938  KQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTP 997

Query: 78   ILKNRHEKVQENCIDLVGRIADRGAE 1
            ILKNRHEKVQENCIDLVGRIADRGAE
Sbjct: 998  ILKNRHEKVQENCIDLVGRIADRGAE 1023


>ref|XP_003557702.1| PREDICTED: splicing factor 3B subunit 1-like isoform 1 [Brachypodium
            distachyon] gi|357111810|ref|XP_003557703.1| PREDICTED:
            splicing factor 3B subunit 1-like isoform 2 [Brachypodium
            distachyon] gi|357111812|ref|XP_003557704.1| PREDICTED:
            splicing factor 3B subunit 1-like isoform 3 [Brachypodium
            distachyon]
          Length = 1276

 Score =  169 bits (428), Expect = 2e-40
 Identities = 83/86 (96%), Positives = 85/86 (98%)
 Frame = -2

Query: 258  KQCQEEQLMGHLGVVLYEHVGEEYPEVLGSILGALKAIVNDIGMTKMTPPIKDLLPRLTP 79
            KQCQEEQLMGHLGVVLYE++GEEYPEVLGSILGALKAIVN IGMTKMTPPIKDLLPRLTP
Sbjct: 935  KQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTP 994

Query: 78   ILKNRHEKVQENCIDLVGRIADRGAE 1
            ILKNRHEKVQENCIDLVGRIADRGAE
Sbjct: 995  ILKNRHEKVQENCIDLVGRIADRGAE 1020