BLASTX nr result

ID: Coptis23_contig00041281 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041281
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268030.2| PREDICTED: tyrosyl-DNA phosphodiesterase 2 [...   155   2e-36
emb|CBI23232.3| unnamed protein product [Vitis vinifera]              155   2e-36
ref|XP_002332611.1| predicted protein [Populus trichocarpa] gi|2...   155   3e-36
ref|XP_004158004.1| PREDICTED: LOW QUALITY PROTEIN: tyrosyl-DNA ...   154   7e-36
ref|XP_004153226.1| PREDICTED: tyrosyl-DNA phosphodiesterase 2-l...   154   7e-36

>ref|XP_002268030.2| PREDICTED: tyrosyl-DNA phosphodiesterase 2 [Vitis vinifera]
          Length = 447

 Score =  155 bits (393), Expect = 2e-36
 Identities = 73/106 (68%), Positives = 79/106 (74%)
 Frame = +2

Query: 2   WDDKLDGNVPFPDGWVDAWAKLRPREDGYTYDTKSNQMLSANRKLQKRLDRFLCSFRDYK 181
           WD+K DG  P PDGWVDAWA LRP E+G+TYDTKSNQMLS NR LQKRLDRF+C   D+K
Sbjct: 339 WDEKSDGQFPLPDGWVDAWADLRPGENGWTYDTKSNQMLSGNRTLQKRLDRFMCRLHDFK 398

Query: 182 ISGIDMIGTEAIPGLSYCXXXXXXXXXXXXMLPVYPSDHYGLLLTI 319
           IS IDMIG E IPGLSYC            +LPV PSDHYGLLLTI
Sbjct: 399 ISKIDMIGMEPIPGLSYCKEKKVRKEMQQLVLPVLPSDHYGLLLTI 444


>emb|CBI23232.3| unnamed protein product [Vitis vinifera]
          Length = 961

 Score =  155 bits (393), Expect = 2e-36
 Identities = 73/106 (68%), Positives = 79/106 (74%)
 Frame = +2

Query: 2    WDDKLDGNVPFPDGWVDAWAKLRPREDGYTYDTKSNQMLSANRKLQKRLDRFLCSFRDYK 181
            WD+K DG  P PDGWVDAWA LRP E+G+TYDTKSNQMLS NR LQKRLDRF+C   D+K
Sbjct: 853  WDEKSDGQFPLPDGWVDAWADLRPGENGWTYDTKSNQMLSGNRTLQKRLDRFMCRLHDFK 912

Query: 182  ISGIDMIGTEAIPGLSYCXXXXXXXXXXXXMLPVYPSDHYGLLLTI 319
            IS IDMIG E IPGLSYC            +LPV PSDHYGLLLTI
Sbjct: 913  ISKIDMIGMEPIPGLSYCKEKKVRKEMQQLVLPVLPSDHYGLLLTI 958


>ref|XP_002332611.1| predicted protein [Populus trichocarpa] gi|222832812|gb|EEE71289.1|
           predicted protein [Populus trichocarpa]
          Length = 422

 Score =  155 bits (392), Expect = 3e-36
 Identities = 73/106 (68%), Positives = 81/106 (76%)
 Frame = +2

Query: 2   WDDKLDGNVPFPDGWVDAWAKLRPREDGYTYDTKSNQMLSANRKLQKRLDRFLCSFRDYK 181
           WDDKLDG  PFPDGWVDAW +L+P ++G+TYDTKSNQMLS NR LQKRLDRF+CS  D+K
Sbjct: 314 WDDKLDGQFPFPDGWVDAWVELKPGDNGWTYDTKSNQMLSGNRALQKRLDRFICSLCDFK 373

Query: 182 ISGIDMIGTEAIPGLSYCXXXXXXXXXXXXMLPVYPSDHYGLLLTI 319
           IS IDMIG +AIPGLSY              LPV PSDHYGLLLTI
Sbjct: 374 ISKIDMIGKDAIPGLSYMKEKKVRKEVKMLELPVLPSDHYGLLLTI 419


>ref|XP_004158004.1| PREDICTED: LOW QUALITY PROTEIN: tyrosyl-DNA phosphodiesterase
           2-like [Cucumis sativus]
          Length = 463

 Score =  154 bits (389), Expect = 7e-36
 Identities = 69/106 (65%), Positives = 82/106 (77%)
 Frame = +2

Query: 2   WDDKLDGNVPFPDGWVDAWAKLRPREDGYTYDTKSNQMLSANRKLQKRLDRFLCSFRDYK 181
           WDDKLDG  PFPDGW+DAW +LRP E+G+TYDTKSN+MLS NR LQKRLDRF+C  +D+K
Sbjct: 355 WDDKLDGRFPFPDGWIDAWEELRPGENGWTYDTKSNKMLSGNRTLQKRLDRFICKLQDFK 414

Query: 182 ISGIDMIGTEAIPGLSYCXXXXXXXXXXXXMLPVYPSDHYGLLLTI 319
           ++ I+MIGT++IPGLSY              LPV PSDHYGLLLTI
Sbjct: 415 VNSIEMIGTDSIPGLSYTKEKKVGKDRKTLELPVLPSDHYGLLLTI 460


>ref|XP_004153226.1| PREDICTED: tyrosyl-DNA phosphodiesterase 2-like [Cucumis sativus]
          Length = 485

 Score =  154 bits (389), Expect = 7e-36
 Identities = 69/106 (65%), Positives = 82/106 (77%)
 Frame = +2

Query: 2   WDDKLDGNVPFPDGWVDAWAKLRPREDGYTYDTKSNQMLSANRKLQKRLDRFLCSFRDYK 181
           WDDKLDG  PFPDGW+DAW +LRP E+G+TYDTKSN+MLS NR LQKRLDRF+C  +D+K
Sbjct: 377 WDDKLDGRFPFPDGWIDAWEELRPGENGWTYDTKSNKMLSGNRTLQKRLDRFICKLQDFK 436

Query: 182 ISGIDMIGTEAIPGLSYCXXXXXXXXXXXXMLPVYPSDHYGLLLTI 319
           ++ I+MIGT++IPGLSY              LPV PSDHYGLLLTI
Sbjct: 437 VNSIEMIGTDSIPGLSYTKEKKVGKDRKTLELPVLPSDHYGLLLTI 482


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