BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041262
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002836143.1| NADH-plastoquinone oxidoreductase subunit 6 ...   209   2e-52
ref|YP_004563920.1| NADH-plastoquinone oxidoreductase subunit 6 ...   208   4e-52
ref|YP_001294238.1| NADH-plastoquinone oxidoreductase subunit 6 ...   204   8e-51
ref|YP_740704.1| NADH-plastoquinone oxidoreductase subunit 6 [Na...   202   2e-50
ref|YP_001004236.1| NADH-plastoquinone oxidoreductase subunit 6 ...   202   2e-50

>ref|YP_002836143.1| NADH-plastoquinone oxidoreductase subunit 6 [Megaleranthis
           saniculifolia] gi|226933935|gb|ACO92068.1|
           NADH-plastoquinone oxidoreductase subunit 6
           [Megaleranthis saniculifolia]
          Length = 177

 Score =  209 bits (532), Expect = 2e-52
 Identities = 105/131 (80%), Positives = 106/131 (80%)
 Frame = +3

Query: 27  MDLPGPIHDFXXXXXXXXXXXXXXXXXXXTNPIFSAFSLGSVLVCTSLFHIPSNSHFVAA 206
           MDLPGPIHDF                   TNPIFSAFSLG VLVCTSLFHIPSNSHFVAA
Sbjct: 1   MDLPGPIHDFLVVFLGLGLIVGGLGVVLLTNPIFSAFSLGLVLVCTSLFHIPSNSHFVAA 60

Query: 207 AQLLIYVGAINVLIVFAVMFMNGSEYYNNFHLWAVGDGATSLVCGSIFFSLITTILDTSW 386
           AQLLIYVGAINVLIVFAVMFMNGSEYYN+FHLW VGDG TSLVC SIF SLITTI DTSW
Sbjct: 61  AQLLIYVGAINVLIVFAVMFMNGSEYYNDFHLWTVGDGVTSLVCTSIFVSLITTIPDTSW 120

Query: 387 YGIIWTTRSNQ 419
           YGIIWTTRSNQ
Sbjct: 121 YGIIWTTRSNQ 131


>ref|YP_004563920.1| NADH-plastoquinone oxidoreductase subunit 6 [Nelumbo lutea]
           gi|334362103|ref|YP_004564156.1| NADH-plastoquinone
           oxidoreductase subunit 6 [Nelumbo nucifera]
           gi|224474188|gb|ACN49377.1| NADH-plastoquinone
           oxidoreductase subunit 6 [Nelumbo lutea]
           gi|224474276|gb|ACN49462.1| NADH-plastoquinone
           oxidoreductase subunit 6 [Nelumbo nucifera]
           gi|290489856|gb|ADD31335.1| NADH-plastoquinone
           oxidoreductase subunit 6 protein [Nelumbo nucifera]
           gi|383286853|gb|AFH01503.1| NADH-plastoquinone
           oxidoreductase subunit 6 (chloroplast) [Nelumbo
           nucifera] gi|383286945|gb|AFH01594.1| NADH-plastoquinone
           oxidoreductase subunit 6 (chloroplast) [Nelumbo lutea]
          Length = 176

 Score =  208 bits (529), Expect = 4e-52
 Identities = 102/131 (77%), Positives = 107/131 (81%)
 Frame = +3

Query: 27  MDLPGPIHDFXXXXXXXXXXXXXXXXXXXTNPIFSAFSLGSVLVCTSLFHIPSNSHFVAA 206
           MDLPGPIHDF                   TNPI+SAFSLG VLVC SLF+IPSNSHFVAA
Sbjct: 1   MDLPGPIHDFLLVFLGSGLILGGLGVVLLTNPIYSAFSLGLVLVCISLFYIPSNSHFVAA 60

Query: 207 AQLLIYVGAINVLIVFAVMFMNGSEYYNNFHLWAVGDGATSLVCGSIFFSLITTILDTSW 386
           AQLLIYVGAINVLI+FAVMFMNGSEYYN+FHLW +GDG TSLVC SIFFSLITTILDTSW
Sbjct: 61  AQLLIYVGAINVLIIFAVMFMNGSEYYNDFHLWTIGDGVTSLVCTSIFFSLITTILDTSW 120

Query: 387 YGIIWTTRSNQ 419
           YGIIWTTRSNQ
Sbjct: 121 YGIIWTTRSNQ 131


>ref|YP_001294238.1| NADH-plastoquinone oxidoreductase subunit 6 [Buxus microphylla]
           gi|221272312|sp|A6MM90.1|NU6C_BUXMI RecName:
           Full=NAD(P)H-quinone oxidoreductase subunit 6,
           chloroplastic; AltName: Full=NAD(P)H dehydrogenase
           subunit 6; AltName: Full=NADH-plastoquinone
           oxidoreductase subunit 6 gi|146762339|gb|ABQ45303.1|
           NADH-plastoquinone oxidoreductase subunit 6 [Buxus
           microphylla]
          Length = 176

 Score =  204 bits (518), Expect = 8e-51
 Identities = 101/131 (77%), Positives = 104/131 (79%)
 Frame = +3

Query: 27  MDLPGPIHDFXXXXXXXXXXXXXXXXXXXTNPIFSAFSLGSVLVCTSLFHIPSNSHFVAA 206
           MDLPGPIHDF                   TNPIFSAFSLG VL C SLFHIPSNSHFVAA
Sbjct: 1   MDLPGPIHDFLLVFLGSGIILGGLGVVLLTNPIFSAFSLGLVLFCISLFHIPSNSHFVAA 60

Query: 207 AQLLIYVGAINVLIVFAVMFMNGSEYYNNFHLWAVGDGATSLVCGSIFFSLITTILDTSW 386
           AQLLIYVGAINVLI+FAVMF NGSEYYN+FH+W VGDG TSLVC SIF SLITTILDTSW
Sbjct: 61  AQLLIYVGAINVLIIFAVMFTNGSEYYNDFHVWTVGDGVTSLVCTSIFVSLITTILDTSW 120

Query: 387 YGIIWTTRSNQ 419
           YGIIWTTRSNQ
Sbjct: 121 YGIIWTTRSNQ 131


>ref|YP_740704.1| NADH-plastoquinone oxidoreductase subunit 6 [Nandina domestica]
           gi|122165914|sp|Q09FQ7.1|NU6C_NANDO RecName:
           Full=NAD(P)H-quinone oxidoreductase subunit 6,
           chloroplastic; AltName: Full=NAD(P)H dehydrogenase
           subunit 6; AltName: Full=NADH-plastoquinone
           oxidoreductase subunit 6 gi|114054525|gb|ABI49918.1|
           NADH-plastoquinone oxidoreductase subunit 6 [Nandina
           domestica]
          Length = 176

 Score =  202 bits (515), Expect = 2e-50
 Identities = 101/131 (77%), Positives = 104/131 (79%)
 Frame = +3

Query: 27  MDLPGPIHDFXXXXXXXXXXXXXXXXXXXTNPIFSAFSLGSVLVCTSLFHIPSNSHFVAA 206
           MDLP PIHDF                   TNPI+SAFSLG VLVC SLFHIP+NSHFVAA
Sbjct: 1   MDLPAPIHDFLLVFLGLGLIVGGLGVVLLTNPIYSAFSLGLVLVCISLFHIPANSHFVAA 60

Query: 207 AQLLIYVGAINVLIVFAVMFMNGSEYYNNFHLWAVGDGATSLVCGSIFFSLITTILDTSW 386
           AQLLIYVGAINVLIVFAVMFMNGSEYYN+FHLW VGDG TSLVC SIF SLITTI DTSW
Sbjct: 61  AQLLIYVGAINVLIVFAVMFMNGSEYYNDFHLWTVGDGVTSLVCTSIFVSLITTISDTSW 120

Query: 387 YGIIWTTRSNQ 419
           YGIIWTTRSNQ
Sbjct: 121 YGIIWTTRSNQ 131


>ref|YP_001004236.1| NADH-plastoquinone oxidoreductase subunit 6 [Ranunculus macranthus]
           gi|221272343|sp|A1XGT8.1|NU6C_RANMC RecName:
           Full=NAD(P)H-quinone oxidoreductase subunit 6,
           chloroplastic; AltName: Full=NAD(P)H dehydrogenase
           subunit 6; AltName: Full=NADH-plastoquinone
           oxidoreductase subunit 6 gi|85540854|gb|ABC70806.1|
           NADH-plastoquinone oxidoreductase subunit 6 [Ranunculus
           macranthus]
          Length = 177

 Score =  202 bits (514), Expect = 2e-50
 Identities = 100/131 (76%), Positives = 105/131 (80%)
 Frame = +3

Query: 27  MDLPGPIHDFXXXXXXXXXXXXXXXXXXXTNPIFSAFSLGSVLVCTSLFHIPSNSHFVAA 206
           MDLPGPIHDF                   TNPIFSAFSLG VLVCTSLF+ PSNSHFVAA
Sbjct: 1   MDLPGPIHDFLLVFLGLGFIMGGLGVVLLTNPIFSAFSLGLVLVCTSLFYTPSNSHFVAA 60

Query: 207 AQLLIYVGAINVLIVFAVMFMNGSEYYNNFHLWAVGDGATSLVCGSIFFSLITTILDTSW 386
           AQLLIYVGAINVLI+FAVMFMNGSEYY++FHLW VGDG TSLVC SIF SLITTI DTSW
Sbjct: 61  AQLLIYVGAINVLIIFAVMFMNGSEYYSDFHLWTVGDGVTSLVCTSIFVSLITTIPDTSW 120

Query: 387 YGIIWTTRSNQ 419
           YGI+WTTRSNQ
Sbjct: 121 YGIVWTTRSNQ 131