BLASTX nr result

ID: Coptis23_contig00041252 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041252
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510877.1| serine-threonine protein kinase, plant-type,...    65   5e-21
ref|XP_002321867.1| predicted protein [Populus trichocarpa] gi|2...    68   6e-21
ref|XP_002271284.1| PREDICTED: PTI1-like tyrosine-protein kinase...    67   2e-20
emb|CBI24473.3| unnamed protein product [Vitis vinifera]               67   2e-20
ref|XP_002318854.1| predicted protein [Populus trichocarpa] gi|2...    67   4e-19

>ref|XP_002510877.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223549992|gb|EEF51479.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 363

 Score = 65.1 bits (157), Expect(2) = 5e-21
 Identities = 26/41 (63%), Positives = 36/41 (87%)
 Frame = -2

Query: 383 KLPGGVKRDIVQWASPLVEKGSFDRMADPRMKGKYDIAQVK 261
           KLPGGVKRDIVQW +P ++KG++D++AD R+KG+YD  Q+K
Sbjct: 249 KLPGGVKRDIVQWVTPYIQKGAYDQIADSRLKGRYDRTQLK 289



 Score = 60.8 bits (146), Expect(2) = 5e-21
 Identities = 28/45 (62%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
 Frame = -3

Query: 262 NSIQIAIRCTDGNPDNRPSMSEVVDWLRGGVR-RKKEVMLIKNFV 131
           ++I IA+RCTD NP+NRPSM+EVVDWL+G +R R KEV  ++N V
Sbjct: 290 SAIMIAMRCTDSNPENRPSMTEVVDWLKGDLRKRSKEVSYVQNKV 334


>ref|XP_002321867.1| predicted protein [Populus trichocarpa] gi|222868863|gb|EEF05994.1|
           predicted protein [Populus trichocarpa]
          Length = 340

 Score = 68.2 bits (165), Expect(2) = 6e-21
 Identities = 28/41 (68%), Positives = 37/41 (90%)
 Frame = -2

Query: 383 KLPGGVKRDIVQWASPLVEKGSFDRMADPRMKGKYDIAQVK 261
           KLPGGV+RDIVQW +P V+KG+FD +ADPR+KG+YD AQ++
Sbjct: 218 KLPGGVRRDIVQWVTPYVQKGAFDHIADPRLKGRYDRAQLE 258



 Score = 57.4 bits (137), Expect(2) = 6e-21
 Identities = 24/43 (55%), Positives = 34/43 (79%)
 Frame = -3

Query: 259 SIQIAIRCTDGNPDNRPSMSEVVDWLRGGVRRKKEVMLIKNFV 131
           +I IA+RCTD NP+NRPSM +VV+WL GG+ R K V ++++ V
Sbjct: 260 AIMIAMRCTDSNPENRPSMMKVVEWLNGGLGRTKGVSVVEDMV 302


>ref|XP_002271284.1| PREDICTED: PTI1-like tyrosine-protein kinase At3g15890-like [Vitis
           vinifera]
          Length = 375

 Score = 67.0 bits (162), Expect(2) = 2e-20
 Identities = 28/41 (68%), Positives = 37/41 (90%)
 Frame = -2

Query: 383 KLPGGVKRDIVQWASPLVEKGSFDRMADPRMKGKYDIAQVK 261
           KLPGGVKRDIVQWA+P V+KG++  +ADPR+KGK+D +Q+K
Sbjct: 246 KLPGGVKRDIVQWATPYVQKGAYHHIADPRLKGKFDRSQLK 286



 Score = 56.6 bits (135), Expect(2) = 2e-20
 Identities = 27/44 (61%), Positives = 34/44 (77%), Gaps = 1/44 (2%)
 Frame = -3

Query: 259 SIQIAIRCTDGNPDNRPSMSEVVDWLRGGV-RRKKEVMLIKNFV 131
           +I +A++CTD NPDNRPSM EVV WL+G V RRK EV+  K+ V
Sbjct: 288 AITVAMKCTDNNPDNRPSMMEVVGWLKGDVGRRKNEVIYAKDGV 331


>emb|CBI24473.3| unnamed protein product [Vitis vinifera]
          Length = 343

 Score = 67.0 bits (162), Expect(2) = 2e-20
 Identities = 28/41 (68%), Positives = 37/41 (90%)
 Frame = -2

Query: 383 KLPGGVKRDIVQWASPLVEKGSFDRMADPRMKGKYDIAQVK 261
           KLPGGVKRDIVQWA+P V+KG++  +ADPR+KGK+D +Q+K
Sbjct: 214 KLPGGVKRDIVQWATPYVQKGAYHHIADPRLKGKFDRSQLK 254



 Score = 56.6 bits (135), Expect(2) = 2e-20
 Identities = 27/44 (61%), Positives = 34/44 (77%), Gaps = 1/44 (2%)
 Frame = -3

Query: 259 SIQIAIRCTDGNPDNRPSMSEVVDWLRGGV-RRKKEVMLIKNFV 131
           +I +A++CTD NPDNRPSM EVV WL+G V RRK EV+  K+ V
Sbjct: 256 AITVAMKCTDNNPDNRPSMMEVVGWLKGDVGRRKNEVIYAKDGV 299


>ref|XP_002318854.1| predicted protein [Populus trichocarpa] gi|222859527|gb|EEE97074.1|
           predicted protein [Populus trichocarpa]
          Length = 334

 Score = 66.6 bits (161), Expect(2) = 4e-19
 Identities = 29/40 (72%), Positives = 36/40 (90%)
 Frame = -2

Query: 383 KLPGGVKRDIVQWASPLVEKGSFDRMADPRMKGKYDIAQV 264
           KLPGGVKRDIVQWA+P V+KG+FD +AD R+KG+YD AQ+
Sbjct: 240 KLPGGVKRDIVQWATPYVQKGAFDHIADLRLKGRYDRAQL 279



 Score = 52.8 bits (125), Expect(2) = 4e-19
 Identities = 23/43 (53%), Positives = 33/43 (76%)
 Frame = -3

Query: 259 SIQIAIRCTDGNPDNRPSMSEVVDWLRGGVRRKKEVMLIKNFV 131
           +I IA+RC+D N +NRPSM +VV+WL GG+ R KEV  +++ V
Sbjct: 282 AIMIAMRCSDTNAENRPSMMKVVEWLNGGLGRTKEVSDVEDMV 324


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