BLASTX nr result

ID: Coptis23_contig00041251 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041251
         (214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310400.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
ref|XP_002323911.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>ref|XP_002310400.1| predicted protein [Populus trichocarpa] gi|222853303|gb|EEE90850.1|
           predicted protein [Populus trichocarpa]
          Length = 474

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/68 (42%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
 Frame = +2

Query: 8   WGNQFAFMNIPIPSYSATD-KVDLKKFIFLARKIIKRSRSSMAVYLNAMXXXXXXXXXXX 184
           WGN FAF+NIPIP     + + +  +F+  ARK+IKR RSS  VYL A            
Sbjct: 314 WGNHFAFLNIPIPKLRDEEARNNPLQFVLKARKVIKRRRSSFGVYLTAKYLQLVGKFSGP 373

Query: 185 EAVSKYVH 208
           +  SKY+H
Sbjct: 374 KRASKYIH 381


>ref|XP_002323911.1| predicted protein [Populus trichocarpa] gi|222866913|gb|EEF04044.1|
           predicted protein [Populus trichocarpa]
          Length = 422

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/67 (37%), Positives = 41/67 (61%)
 Frame = +2

Query: 8   WGNQFAFMNIPIPSYSATDKVDLKKFIFLARKIIKRSRSSMAVYLNAMXXXXXXXXXXXE 187
           WGN FAF+++ +P   A+ +++  +F+  A++IIKR RSS+AVYL A            E
Sbjct: 265 WGNHFAFLHVQLPELVASTELNPIEFVRKAQQIIKRKRSSLAVYLTAAFIEIVKKLKGHE 324

Query: 188 AVSKYVH 208
             ++Y+H
Sbjct: 325 VAAQYIH 331


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