BLASTX nr result

ID: Coptis23_contig00041244 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041244
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN57401.1| At1g78850-like protein [Capsella rubella] gi|2245...    93   2e-17
gb|ACN57418.1| At1g78850-like protein [Capsella grandiflora] gi|...    92   6e-17
gb|ACN57417.1| At1g78850-like protein [Capsella grandiflora] gi|...    92   6e-17
ref|XP_003543212.1| PREDICTED: epidermis-specific secreted glyco...    91   7e-17
gb|ACN57431.1| At1g78850-like protein [Capsella grandiflora]           91   7e-17

>gb|ACN57401.1| At1g78850-like protein [Capsella rubella]
           gi|224577457|gb|ACN57402.1| At1g78850-like protein
           [Capsella rubella] gi|224577459|gb|ACN57403.1|
           At1g78850-like protein [Capsella rubella]
           gi|224577461|gb|ACN57404.1| At1g78850-like protein
           [Capsella rubella] gi|224577463|gb|ACN57405.1|
           At1g78850-like protein [Capsella rubella]
           gi|224577465|gb|ACN57406.1| At1g78850-like protein
           [Capsella rubella] gi|224577467|gb|ACN57407.1|
           At1g78850-like protein [Capsella rubella]
           gi|224577469|gb|ACN57408.1| At1g78850-like protein
           [Capsella rubella] gi|224577471|gb|ACN57409.1|
           At1g78850-like protein [Capsella rubella]
           gi|224577473|gb|ACN57410.1| At1g78850-like protein
           [Capsella rubella] gi|224577475|gb|ACN57411.1|
           At1g78850-like protein [Capsella rubella]
           gi|224577477|gb|ACN57412.1| At1g78850-like protein
           [Capsella rubella] gi|224577479|gb|ACN57413.1|
           At1g78850-like protein [Capsella rubella]
           gi|224577481|gb|ACN57414.1| At1g78850-like protein
           [Capsella rubella]
          Length = 150

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 44/87 (50%), Positives = 61/87 (70%)
 Frame = -2

Query: 334 LKVLSNGNLVLIDRRGSIVWQSFDHPTDSLLVGQSLLPGDKNKLTSRLSPFDNLRKGPYS 155
           +K+L NGN+V+ D  G  VWQSFD PTD+LLVGQSL    +NKL SRLSP  N + GPYS
Sbjct: 21  IKILENGNMVIYDSNGKFVWQSFDSPTDTLLVGQSLKLNGRNKLVSRLSPSVN-KNGPYS 79

Query: 154 LVMDGGRMLFYYQSKQSPEQQIYSQMQ 74
           LVM+  +++ YY + ++P+   Y + +
Sbjct: 80  LVMEAKKLVLYYTTNKTPKPIAYYEYE 106


>gb|ACN57418.1| At1g78850-like protein [Capsella grandiflora]
           gi|224577493|gb|ACN57420.1| At1g78850-like protein
           [Capsella grandiflora] gi|224577495|gb|ACN57421.1|
           At1g78850-like protein [Capsella grandiflora]
           gi|224577501|gb|ACN57424.1| At1g78850-like protein
           [Capsella grandiflora] gi|224577517|gb|ACN57432.1|
           At1g78850-like protein [Capsella grandiflora]
          Length = 150

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 44/87 (50%), Positives = 60/87 (68%)
 Frame = -2

Query: 334 LKVLSNGNLVLIDRRGSIVWQSFDHPTDSLLVGQSLLPGDKNKLTSRLSPFDNLRKGPYS 155
           +K+L NGN+V+ D  G  VWQSFD PTD+LLVGQSL    +NKL SRLSP  N   GPYS
Sbjct: 21  IKILENGNMVIYDSNGKFVWQSFDSPTDTLLVGQSLKLBGRNKLVSRLSPSVN-XNGPYS 79

Query: 154 LVMDGGRMLFYYQSKQSPEQQIYSQMQ 74
           LVM+  +++ YY + ++P+   Y + +
Sbjct: 80  LVMEAKKLVLYYTTNKTPKPIAYYEYE 106


>gb|ACN57417.1| At1g78850-like protein [Capsella grandiflora]
           gi|224577491|gb|ACN57419.1| At1g78850-like protein
           [Capsella grandiflora] gi|224577497|gb|ACN57422.1|
           At1g78850-like protein [Capsella grandiflora]
           gi|224577499|gb|ACN57423.1| At1g78850-like protein
           [Capsella grandiflora]
          Length = 150

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 44/87 (50%), Positives = 60/87 (68%)
 Frame = -2

Query: 334 LKVLSNGNLVLIDRRGSIVWQSFDHPTDSLLVGQSLLPGDKNKLTSRLSPFDNLRKGPYS 155
           +K+L NGN+V+ D  G  VWQSFD PTD+LLVGQSL    +NKL SRLSP  N   GPYS
Sbjct: 21  IKILENGNMVIYDSNGKFVWQSFDSPTDTLLVGQSLKLBGRNKLVSRLSPSVN-XNGPYS 79

Query: 154 LVMDGGRMLFYYQSKQSPEQQIYSQMQ 74
           LVM+  +++ YY + ++P+   Y + +
Sbjct: 80  LVMEAKKLVLYYTTNKTPKPIXYYEYE 106


>ref|XP_003543212.1| PREDICTED: epidermis-specific secreted glycoprotein EP1-like
           [Glycine max]
          Length = 435

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 45/82 (54%), Positives = 60/82 (73%)
 Frame = -2

Query: 331 KVLSNGNLVLIDRRGSIVWQSFDHPTDSLLVGQSLLPGDKNKLTSRLSPFDNLRKGPYSL 152
           ++LSNGN+VL+D +G  VWQSFDHPTD+LLVGQ L     +KL SRLS  +N+  GPYSL
Sbjct: 140 RLLSNGNMVLLDAQGGFVWQSFDHPTDTLLVGQYLRAKGPSKLVSRLSEKENV-DGPYSL 198

Query: 151 VMDGGRMLFYYQSKQSPEQQIY 86
           V++   +  YY+SK SP+  +Y
Sbjct: 199 VLEPKGLALYYKSKNSPKPILY 220


>gb|ACN57431.1| At1g78850-like protein [Capsella grandiflora]
          Length = 150

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 44/87 (50%), Positives = 60/87 (68%)
 Frame = -2

Query: 334 LKVLSNGNLVLIDRRGSIVWQSFDHPTDSLLVGQSLLPGDKNKLTSRLSPFDNLRKGPYS 155
           +K+L NGN+V+ D  G  VWQSFD PTD+LLVGQSL    +NKL SRLSP  N   GPYS
Sbjct: 21  IKILENGNMVIYDSNGKFVWQSFDSPTDTLLVGQSLKLBGRNKLXSRLSPSVN-XNGPYS 79

Query: 154 LVMDGGRMLFYYQSKQSPEQQIYSQMQ 74
           LVM+  +++ YY + ++P+   Y + +
Sbjct: 80  LVMEAKKLVLYYTTNKTPKPIXYYEYE 106


Top