BLASTX nr result
ID: Coptis23_contig00041230
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00041230
(211 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004156907.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP... 57 3e-19
ref|NP_001051038.1| Os03g0708600 [Oryza sativa Japonica Group] g... 57 8e-19
ref|XP_001765435.1| predicted protein [Physcomitrella patens sub... 57 8e-18
gb|EFN60128.1| hypothetical protein CHLNCDRAFT_56582 [Chlorella ... 54 2e-17
gb|EIE24677.1| P-loop containing nucleoside triphosphate hydrola... 51 2e-16
>ref|XP_004156907.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
21-like [Cucumis sativus]
Length = 715
Score = 56.6 bits (135), Expect(3) = 3e-19
Identities = 27/28 (96%), Positives = 27/28 (96%)
Frame = +3
Query: 126 YMFSATMPPAVEGLARKYLRNPVVVTIG 209
YMFSATMPPAVE LARKYLRNPVVVTIG
Sbjct: 497 YMFSATMPPAVERLARKYLRNPVVVTIG 524
Score = 46.2 bits (108), Expect(3) = 3e-19
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = +1
Query: 46 DQMPSSNLKPENEFEKIDEKRIYRTTCICS 135
D MPSSNLKPENE E++DEK+ YRTT + S
Sbjct: 471 DAMPSSNLKPENEDEELDEKKXYRTTYMFS 500
Score = 37.0 bits (84), Expect(3) = 3e-19
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +2
Query: 2 LNQCNYVVLDEADRMI 49
LNQCNYVVLDEADRMI
Sbjct: 443 LNQCNYVVLDEADRMI 458
>ref|NP_001051038.1| Os03g0708600 [Oryza sativa Japonica Group]
gi|75320262|sp|Q53RK8.1|RH21_ORYSJ RecName:
Full=DEAD-box ATP-dependent RNA helicase 21
gi|62733557|gb|AAX95674.1| DEAD/DEAH box helicase,
putative [Oryza sativa Japonica Group]
gi|108710689|gb|ABF98484.1| transposon protein,
putative, CACTA, En/Spm sub-class, expressed [Oryza
sativa Japonica Group] gi|108710690|gb|ABF98485.1|
transposon protein, putative, CACTA, En/Spm sub-class,
expressed [Oryza sativa Japonica Group]
gi|108710691|gb|ABF98486.1| transposon protein,
putative, CACTA, En/Spm sub-class, expressed [Oryza
sativa Japonica Group] gi|113549509|dbj|BAF12952.1|
Os03g0708600 [Oryza sativa Japonica Group]
gi|125545447|gb|EAY91586.1| hypothetical protein
OsI_13221 [Oryza sativa Indica Group]
gi|125587655|gb|EAZ28319.1| hypothetical protein
OsJ_12293 [Oryza sativa Japonica Group]
gi|215697317|dbj|BAG91311.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 736
Score = 56.6 bits (135), Expect(3) = 8e-19
Identities = 27/28 (96%), Positives = 27/28 (96%)
Frame = +3
Query: 126 YMFSATMPPAVEGLARKYLRNPVVVTIG 209
YMFSATMPPAVE LARKYLRNPVVVTIG
Sbjct: 517 YMFSATMPPAVERLARKYLRNPVVVTIG 544
Score = 44.7 bits (104), Expect(3) = 8e-19
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = +1
Query: 46 DQMPSSNLKPENEFEKIDEKRIYRTTCICS 135
D MPSSNLKPENE E++D K IYRTT + S
Sbjct: 491 DAMPSSNLKPENEDEELDAKTIYRTTYMFS 520
Score = 37.0 bits (84), Expect(3) = 8e-19
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +2
Query: 2 LNQCNYVVLDEADRMI 49
LNQCNYVVLDEADRMI
Sbjct: 463 LNQCNYVVLDEADRMI 478
>ref|XP_001765435.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683285|gb|EDQ69696.1| predicted protein
[Physcomitrella patens subsp. patens]
Length = 535
Score = 56.6 bits (135), Expect(3) = 8e-18
Identities = 27/28 (96%), Positives = 27/28 (96%)
Frame = +3
Query: 126 YMFSATMPPAVEGLARKYLRNPVVVTIG 209
YMFSATMPPAVE LARKYLRNPVVVTIG
Sbjct: 316 YMFSATMPPAVERLARKYLRNPVVVTIG 343
Score = 41.2 bits (95), Expect(3) = 8e-18
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +1
Query: 46 DQMPSSNLKPENEFEKIDEKRIYRTTCICS 135
D MPSSNLKPENE ++D +IYRTT + S
Sbjct: 290 DAMPSSNLKPENEDAELDTHKIYRTTYMFS 319
Score = 37.0 bits (84), Expect(3) = 8e-18
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +2
Query: 2 LNQCNYVVLDEADRMI 49
LNQCNYVVLDEADRMI
Sbjct: 262 LNQCNYVVLDEADRMI 277
>gb|EFN60128.1| hypothetical protein CHLNCDRAFT_56582 [Chlorella variabilis]
Length = 863
Score = 53.9 bits (128), Expect(3) = 2e-17
Identities = 25/28 (89%), Positives = 26/28 (92%)
Frame = +3
Query: 126 YMFSATMPPAVEGLARKYLRNPVVVTIG 209
YMFSATMPPAVE LARKYLR PVV+TIG
Sbjct: 646 YMFSATMPPAVERLARKYLRRPVVITIG 673
Score = 42.7 bits (99), Expect(3) = 2e-17
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +1
Query: 46 DQMPSSNLKPENEFEKIDEKRIYRTTCICS 135
D MPSSNLKPENE E ++ R+YRTT + S
Sbjct: 620 DAMPSSNLKPENEDEPLESNRVYRTTYMFS 649
Score = 37.0 bits (84), Expect(3) = 2e-17
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +2
Query: 2 LNQCNYVVLDEADRMI 49
LNQCNYVVLDEADRMI
Sbjct: 589 LNQCNYVVLDEADRMI 604
>gb|EIE24677.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coccomyxa subellipsoidea C-169]
Length = 735
Score = 51.2 bits (121), Expect(3) = 2e-16
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +3
Query: 126 YMFSATMPPAVEGLARKYLRNPVVVTIG 209
YMFSATMPPAVE LARKY+R PVV+ IG
Sbjct: 520 YMFSATMPPAVERLARKYMRRPVVINIG 547
Score = 42.0 bits (97), Expect(3) = 2e-16
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = +1
Query: 46 DQMPSSNLKPENEFEKIDEKRIYRTTCICS 135
D MPS+NLKPE E E+++E R+YRTT + S
Sbjct: 494 DAMPSTNLKPEQEDEELEENRVYRTTYMFS 523
Score = 37.0 bits (84), Expect(3) = 2e-16
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +2
Query: 2 LNQCNYVVLDEADRMI 49
LNQCNYVVLDEADRMI
Sbjct: 466 LNQCNYVVLDEADRMI 481