BLASTX nr result

ID: Coptis23_contig00041224 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041224
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK95557.1| unknown [Populus trichocarpa]                           84   2e-14
ref|XP_002319039.1| predicted protein [Populus trichocarpa] gi|2...    80   1e-13
ref|XP_002512307.1| conserved hypothetical protein [Ricinus comm...    79   3e-13
ref|XP_002266105.1| PREDICTED: uncharacterized protein LOC100267...    79   4e-13
ref|NP_001233778.1| stress regulated protein [Solanum lycopersic...    73   2e-11

>gb|ABK95557.1| unknown [Populus trichocarpa]
          Length = 330

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 48/79 (60%), Positives = 59/79 (74%)
 Frame = +1

Query: 31  MGMLIQYSGLLPHPRLRIHAFRTACSSEPGVAGTSASGVSRLSVLEQVDKELVKGNEREA 210
           MG ++ Y+GL+P PRLR+      CS +  + G+S  GV R  VLEQVDKEL KG+ER A
Sbjct: 1   MGTVVYYTGLVP-PRLRL------CSKK--IVGSSV-GVQRQQVLEQVDKELSKGDERAA 50

Query: 211 LSLVKNLQGQPGGLRCFGA 267
           LSLVK+LQG+PGGLRCFGA
Sbjct: 51  LSLVKDLQGKPGGLRCFGA 69


>ref|XP_002319039.1| predicted protein [Populus trichocarpa] gi|222857415|gb|EEE94962.1|
           predicted protein [Populus trichocarpa]
          Length = 330

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 47/79 (59%), Positives = 58/79 (73%)
 Frame = +1

Query: 31  MGMLIQYSGLLPHPRLRIHAFRTACSSEPGVAGTSASGVSRLSVLEQVDKELVKGNEREA 210
           MG ++ Y+GL+  PRLR+      CS +  + G+S  GV R  VLEQVDKEL KG+ER A
Sbjct: 1   MGTVVYYTGLVS-PRLRL------CSKK--IVGSSV-GVQRQQVLEQVDKELSKGDERAA 50

Query: 211 LSLVKNLQGQPGGLRCFGA 267
           LSLVK+LQG+PGGLRCFGA
Sbjct: 51  LSLVKDLQGKPGGLRCFGA 69


>ref|XP_002512307.1| conserved hypothetical protein [Ricinus communis]
           gi|223548268|gb|EEF49759.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 337

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 43/80 (53%), Positives = 57/80 (71%)
 Frame = +1

Query: 31  MGMLIQYSGLLPHPRLRIHAFRTACSSEPGVAGTSASGVSRLSVLEQVDKELVKGNEREA 210
           MG  I Y  L+   R R+++FR   SS    + +S+ GVSR  VLEQVDKEL KG+ER A
Sbjct: 1   MGTAIGYKCLVCPVRARLYSFRIVSSSS---SSSSSVGVSRQQVLEQVDKELKKGDERAA 57

Query: 211 LSLVKNLQGQPGGLRCFGAA 270
           L+LV++LQG+P GL+C+GAA
Sbjct: 58  LALVRDLQGKPAGLKCYGAA 77


>ref|XP_002266105.1| PREDICTED: uncharacterized protein LOC100267587 [Vitis vinifera]
           gi|298205011|emb|CBI34318.3| unnamed protein product
           [Vitis vinifera]
          Length = 332

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 41/80 (51%), Positives = 53/80 (66%)
 Frame = +1

Query: 31  MGMLIQYSGLLPHPRLRIHAFRTACSSEPGVAGTSASGVSRLSVLEQVDKELVKGNEREA 210
           MG ++  + +  HPRLR+   R        +  +  + VSR  VLEQVDKEL KG++R A
Sbjct: 1   MGTVVYRAAVCSHPRLRVPTLR--------IVSSLGTNVSRWQVLEQVDKELAKGDDRTA 52

Query: 211 LSLVKNLQGQPGGLRCFGAA 270
           LSLVK+LQG+P GLRCFGAA
Sbjct: 53  LSLVKDLQGKPDGLRCFGAA 72


>ref|NP_001233778.1| stress regulated protein [Solanum lycopersicum]
           gi|58198163|gb|AAW65813.1| stress regulated protein
           [Solanum lycopersicum]
          Length = 326

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 39/56 (69%), Positives = 46/56 (82%)
 Frame = +1

Query: 103 CSSEPGVAGTSASGVSRLSVLEQVDKELVKGNEREALSLVKNLQGQPGGLRCFGAA 270
           C SE  +  +++  VS LSVLEQVDKEL KG+ER ALSLVK+LQG+PGGLRCFGAA
Sbjct: 13  CCSE--LRSSNSRIVSGLSVLEQVDKELTKGDERAALSLVKDLQGKPGGLRCFGAA 66


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