BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041204
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002864047.1| hypothetical protein ARALYDRAFT_918034 [Arab...    91   1e-28
gb|ABA97422.2| Leucine Rich Repeat family protein, expressed [Or...    84   4e-28
ref|XP_003625287.1| Pre-mRNA-splicing factor CWC22-like protein ...    77   5e-27
ref|XP_003625272.1| Pre-mRNA-splicing factor CWC22-like protein ...    77   2e-26
gb|ELR22759.1| MIF4G domain containing protein [Acanthamoeba cas...    74   3e-24

>ref|XP_002864047.1| hypothetical protein ARALYDRAFT_918034 [Arabidopsis lyrata subsp.
           lyrata] gi|297309882|gb|EFH40306.1| hypothetical protein
           ARALYDRAFT_918034 [Arabidopsis lyrata subsp. lyrata]
          Length = 604

 Score = 90.5 bits (223), Expect(2) = 1e-28
 Identities = 39/49 (79%), Positives = 43/49 (87%)
 Frame = -1

Query: 282 GQEMELCIILLECCTQEQTYLAYYGLLGQRLCMINKIHQQNFETCFVNQ 136
           GQEMELCI+LLECC+QE+TYL YYGLLGQR CM+ KIHQ NFE CFV Q
Sbjct: 410 GQEMELCIMLLECCSQEKTYLPYYGLLGQRFCMLKKIHQANFEKCFVQQ 458



 Score = 60.8 bits (146), Expect(2) = 1e-28
 Identities = 31/51 (60%), Positives = 39/51 (76%)
 Frame = -3

Query: 154 DVLCQSVLSYIRLTEEDTTSSSRIFIKFLFRELVEQLGMQLLNERLKVPEM 2
           D L   VL YIRLTE+ TTSSSRIF+K LF +L + LG+++LNERL+ P M
Sbjct: 484 DALPWHVLGYIRLTEDYTTSSSRIFVKILFLKLSDDLGIKILNERLQDPTM 534


>gb|ABA97422.2| Leucine Rich Repeat family protein, expressed [Oryza sativa
           Japonica Group]
          Length = 985

 Score = 84.0 bits (206), Expect(2) = 4e-28
 Identities = 35/47 (74%), Positives = 42/47 (89%)
 Frame = -1

Query: 276 EMELCIILLECCTQEQTYLAYYGLLGQRLCMINKIHQQNFETCFVNQ 136
           EMELCI+LLECC+QE+TYL YYGLL QRLC+INK++Q+NFE CF  Q
Sbjct: 92  EMELCIMLLECCSQERTYLPYYGLLAQRLCLINKVYQKNFEKCFAKQ 138



 Score = 65.9 bits (159), Expect(2) = 4e-28
 Identities = 34/51 (66%), Positives = 40/51 (78%)
 Frame = -3

Query: 154 DVLCQSVLSYIRLTEEDTTSSSRIFIKFLFRELVEQLGMQLLNERLKVPEM 2
           D L   VL+YIRLTEEDTTSSSRIFIK LF EL + LG++ LN+RL  P+M
Sbjct: 164 DALPWHVLAYIRLTEEDTTSSSRIFIKILFHELSDHLGIRQLNKRLSDPKM 214


>ref|XP_003625287.1| Pre-mRNA-splicing factor CWC22-like protein [Medicago truncatula]
           gi|355500302|gb|AES81505.1| Pre-mRNA-splicing factor
           CWC22-like protein [Medicago truncatula]
          Length = 455

 Score = 76.6 bits (187), Expect(2) = 5e-27
 Identities = 31/54 (57%), Positives = 41/54 (75%)
 Frame = -1

Query: 282 GQEMELCIILLECCTQEQTYLAYYGLLGQRLCMINKIHQQNFETCFVNQCCHIY 121
           GQE++LC ++L+CC  E+ Y  YYGLLG+R CMINK++QQNFE CF  Q   I+
Sbjct: 271 GQEIQLCNMILQCCRYEKVYRPYYGLLGERFCMINKVYQQNFEKCFAQQLSTIH 324



 Score = 69.3 bits (168), Expect(2) = 5e-27
 Identities = 35/46 (76%), Positives = 40/46 (86%)
 Frame = -3

Query: 139 SVLSYIRLTEEDTTSSSRIFIKFLFRELVEQLGMQLLNERLKVPEM 2
           +VLSYIRLTEEDTTSSSRIFIK LF+EL E LG+Q+LN+RL  P M
Sbjct: 350 NVLSYIRLTEEDTTSSSRIFIKILFQELSEHLGIQVLNDRLNDPVM 395


>ref|XP_003625272.1| Pre-mRNA-splicing factor CWC22-like protein [Medicago truncatula]
           gi|355500287|gb|AES81490.1| Pre-mRNA-splicing factor
           CWC22-like protein [Medicago truncatula]
          Length = 241

 Score = 76.6 bits (187), Expect(2) = 2e-26
 Identities = 31/54 (57%), Positives = 41/54 (75%)
 Frame = -1

Query: 282 GQEMELCIILLECCTQEQTYLAYYGLLGQRLCMINKIHQQNFETCFVNQCCHIY 121
           GQE++LC ++L+CC  E+ Y  YYGLLG+R CMINK++QQNFE CF  Q   I+
Sbjct: 57  GQEIQLCNMILQCCRYEKVYRPYYGLLGERFCMINKVYQQNFEKCFAQQLSTIH 110



 Score = 67.8 bits (164), Expect(2) = 2e-26
 Identities = 34/46 (73%), Positives = 39/46 (84%)
 Frame = -3

Query: 139 SVLSYIRLTEEDTTSSSRIFIKFLFRELVEQLGMQLLNERLKVPEM 2
           +VLSYIRLTEEDTTS+SRIFIK LF+EL E LG+ +LNERL  P M
Sbjct: 136 NVLSYIRLTEEDTTSASRIFIKILFQELSEHLGIHVLNERLNDPAM 181


>gb|ELR22759.1| MIF4G domain containing protein [Acanthamoeba castellanii str.
           Neff]
          Length = 597

 Score = 73.9 bits (180), Expect(2) = 3e-24
 Identities = 29/48 (60%), Positives = 41/48 (85%)
 Frame = -1

Query: 279 QEMELCIILLECCTQEQTYLAYYGLLGQRLCMINKIHQQNFETCFVNQ 136
           QE+E+C ++LECC+QE+TYL +YGLLGQR CMI++ +Q+ F+ CFV Q
Sbjct: 345 QEIEVCRMILECCSQERTYLRFYGLLGQRFCMIDRAYQEQFDLCFVKQ 392



 Score = 62.8 bits (151), Expect(2) = 3e-24
 Identities = 34/51 (66%), Positives = 38/51 (74%)
 Frame = -3

Query: 154 DVLCQSVLSYIRLTEEDTTSSSRIFIKFLFRELVEQLGMQLLNERLKVPEM 2
           D L  SVLSYI L EE+TTSSSRIFIK LF+E+ E LG+  LN RLK P M
Sbjct: 418 DGLPWSVLSYIHLNEEETTSSSRIFIKILFQEISEYLGLPKLNARLKDPTM 468