BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041185
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...    68   7e-10
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...    67   1e-09
ref|XP_003594237.1| F-box protein [Medicago truncatula] gi|35548...    64   1e-08
ref|XP_003594238.1| F-box protein [Medicago truncatula] gi|35548...    64   1e-08
ref|XP_002532277.1| conserved hypothetical protein [Ricinus comm...    64   1e-08

>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
           gi|147785390|emb|CAN68678.1| hypothetical protein
           VITISV_041941 [Vitis vinifera]
          Length = 409

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 32/70 (45%), Positives = 44/70 (62%)
 Frame = +1

Query: 10  IISFKLDSEEFQQLPLPPSLCSGTENFCLYLSALGGCLSLVHIVSNEHIEIWVMKEYGMQ 189
           I+SF L  E+F+++P P   C G      +L  LGGCLS     SN  +E+WVMKEY ++
Sbjct: 255 IVSFDLADEQFREIPKPD--CGGLSRCNYHLLVLGGCLSAAVHRSNGKLEVWVMKEYDVK 312

Query: 190 SSWVKEYTIG 219
            SW+KE+ IG
Sbjct: 313 ESWIKEFNIG 322


>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
           gi|222843314|gb|EEE80861.1| f-box family protein
           [Populus trichocarpa]
          Length = 408

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/73 (43%), Positives = 45/73 (61%)
 Frame = +1

Query: 10  IISFKLDSEEFQQLPLPPSLCSGTENFCLYLSALGGCLSLVHIVSNEHIEIWVMKEYGMQ 189
           ++SF L  E+F+++P P   C G      +L+ L GCLS+    +   +EIWVMKEY ++
Sbjct: 255 LVSFDLTDEQFREVPKPD--CGGLNRCDYHLAVLRGCLSVAVYCNYGRLEIWVMKEYNVK 312

Query: 190 SSWVKEYTIGNVM 228
            SWVKEY IG  M
Sbjct: 313 ESWVKEYNIGAYM 325


>ref|XP_003594237.1| F-box protein [Medicago truncatula] gi|355483285|gb|AES64488.1|
           F-box protein [Medicago truncatula]
          Length = 391

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 29/73 (39%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
 Frame = +1

Query: 4   DVIISFKLDSEEFQQLPLPP--SLCSGTENFCLYLSALGGCLSLVHIVSNEHIEIWVMKE 177
           D+I++F L  E F ++PLP    + + +E+F + ++ LGGCLS++       I++WVMKE
Sbjct: 225 DLIVAFNLTLEIFNEVPLPEIGEVNNESESFEIDVAVLGGCLSMIVNYQTTQIDVWVMKE 284

Query: 178 YGMQSSWVKEYTI 216
           YG++ SW K +T+
Sbjct: 285 YGLKDSWCKLFTL 297


>ref|XP_003594238.1| F-box protein [Medicago truncatula] gi|355483286|gb|AES64489.1|
           F-box protein [Medicago truncatula]
          Length = 398

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 29/73 (39%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
 Frame = +1

Query: 4   DVIISFKLDSEEFQQLPLPP--SLCSGTENFCLYLSALGGCLSLVHIVSNEHIEIWVMKE 177
           D+I++F L  E F ++PLP    + + +E+F + ++ LGGCLS++       I++WVMKE
Sbjct: 225 DLIVAFNLTLEIFNEVPLPEIGEVNNESESFEIDVAVLGGCLSMIVNYQTTQIDVWVMKE 284

Query: 178 YGMQSSWVKEYTI 216
           YG++ SW K +T+
Sbjct: 285 YGLKDSWCKLFTL 297


>ref|XP_002532277.1| conserved hypothetical protein [Ricinus communis]
           gi|223528011|gb|EEF30092.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 410

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 33/70 (47%), Positives = 45/70 (64%)
 Frame = +1

Query: 10  IISFKLDSEEFQQLPLPPSLCSGTENFCLYLSALGGCLSLVHIVSNEHIEIWVMKEYGMQ 189
           +ISF L  E+F+++P P     G    C +L+ L GCLS V +     + IWVMKEYG++
Sbjct: 256 LISFDLADEQFREVPCPVGASFGRH--CSHLATLRGCLSGV-VQGFRRLYIWVMKEYGVK 312

Query: 190 SSWVKEYTIG 219
            SWVKE+TIG
Sbjct: 313 ESWVKEFTIG 322