BLASTX nr result

ID: Coptis23_contig00041167 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041167
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528482.1| conserved hypothetical protein [Ricinus comm...    55   8e-06

>ref|XP_002528482.1| conserved hypothetical protein [Ricinus communis]
           gi|223532091|gb|EEF33899.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 92

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 6/67 (8%)
 Frame = -3

Query: 304 LFPHPSLAMRRL------REVDTDSEEGSLKDVENMLLRGEVGHLPRVKLHEVHSGPNPI 143
           L P P LA+R+L      R + +   E  +KD ++    GE GH+ R +LHEVHSGPNPI
Sbjct: 19  LHPLPCLALRKLEDAQVVRYISSSDLEIFMKDFQSF---GEGGHVHRKELHEVHSGPNPI 75

Query: 142 SNFFPQR 122
           SN  PQ+
Sbjct: 76  SNTIPQQ 82


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