BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041159
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADP89574.1| PsbP domain protein 1 [Gossypium hirsutum]             135   3e-30
ref|XP_002512537.1| Thylakoid lumenal 21.5 kDa protein, chloropl...   134   1e-29
ref|XP_002330072.1| predicted protein [Populus trichocarpa] gi|2...   131   6e-29
ref|XP_002281448.2| PREDICTED: psbP domain-containing protein 1,...   129   3e-28
emb|CBI39622.3| unnamed protein product [Vitis vinifera]              129   3e-28

>gb|ADP89574.1| PsbP domain protein 1 [Gossypium hirsutum]
          Length = 257

 Score =  135 bits (341), Expect = 3e-30
 Identities = 70/114 (61%), Positives = 82/114 (71%), Gaps = 2/114 (1%)
 Frame = +2

Query: 2   CTCRVQHHKASKVPRRNMLALMLSSVILQD-GSCDN-ALAQPSVAFREYIDSFDGYSFKY 175
           CT R Q  +AS +PRRN +AL+LS+ I  + G  DN A A+PSV FREYID+FDGYS KY
Sbjct: 32  CTRRNQSFQASSIPRRNAMALILSTYIFSEVGLHDNIAFAEPSVGFREYIDTFDGYSLKY 91

Query: 176 PQNWIPVRGAGADIFFRDPFILDENLXXXXXXXXXXXXXXVEDLGPPQVAGEKV 337
           PQNWI VRGAGADIFFRDP++LDENL              VEDLGPP+ AG+KV
Sbjct: 92  PQNWIQVRGAGADIFFRDPYVLDENLSVELSSPSSSRYKTVEDLGPPEEAGKKV 145


>ref|XP_002512537.1| Thylakoid lumenal 21.5 kDa protein, chloroplast precursor, putative
           [Ricinus communis] gi|223548498|gb|EEF49989.1| Thylakoid
           lumenal 21.5 kDa protein, chloroplast precursor,
           putative [Ricinus communis]
          Length = 265

 Score =  134 bits (336), Expect = 1e-29
 Identities = 69/112 (61%), Positives = 81/112 (72%), Gaps = 1/112 (0%)
 Frame = +2

Query: 5   TCRVQHHKASKVPRRNMLALMLSSVILQD-GSCDNALAQPSVAFREYIDSFDGYSFKYPQ 181
           +C+ Q  KA  VPRR+ +AL+ SS IL + G   +ALAQ SV FREYID+FDGYSFKYP+
Sbjct: 44  SCKNQPTKAFAVPRRSTMALIFSSCILSEVGFHSSALAQSSVGFREYIDTFDGYSFKYPK 103

Query: 182 NWIPVRGAGADIFFRDPFILDENLXXXXXXXXXXXXXXVEDLGPPQVAGEKV 337
           NWI VRGAGADIFFRDP++LDENL              VEDLGPPQ AG+KV
Sbjct: 104 NWIQVRGAGADIFFRDPYVLDENLSVEMSSPSSSKYTSVEDLGPPQEAGKKV 155


>ref|XP_002330072.1| predicted protein [Populus trichocarpa] gi|222871497|gb|EEF08628.1|
           predicted protein [Populus trichocarpa]
          Length = 212

 Score =  131 bits (329), Expect = 6e-29
 Identities = 67/101 (66%), Positives = 73/101 (72%), Gaps = 1/101 (0%)
 Frame = +2

Query: 38  VPRRNMLALMLSSVILQDGSCDN-ALAQPSVAFREYIDSFDGYSFKYPQNWIPVRGAGAD 214
           VPRRN +AL+LSS +  +   DN A AQ SV FREYID FDGYSFKYPQNWI VRGAGAD
Sbjct: 2   VPRRNAMALILSSYMFSEFGFDNLAFAQQSVGFREYIDQFDGYSFKYPQNWIQVRGAGAD 61

Query: 215 IFFRDPFILDENLXXXXXXXXXXXXXXVEDLGPPQVAGEKV 337
           IFFRDPF+LDENL              VEDLGPPQ AG+KV
Sbjct: 62  IFFRDPFVLDENLSVELSSPSSSRYKSVEDLGPPQEAGKKV 102


>ref|XP_002281448.2| PREDICTED: psbP domain-containing protein 1, chloroplastic [Vitis
           vinifera]
          Length = 282

 Score =  129 bits (323), Expect = 3e-28
 Identities = 68/112 (60%), Positives = 78/112 (69%), Gaps = 1/112 (0%)
 Frame = +2

Query: 5   TCRVQHHKASKVPRRNMLALMLSSVILQD-GSCDNALAQPSVAFREYIDSFDGYSFKYPQ 181
           +C++Q  K   V RR+ +AL+ SS I    G  D ALAQPSV FREYID+FDGYSFKYPQ
Sbjct: 59  SCQLQTTKGFAVLRRDAMALIFSSYIFSRVGLHDVALAQPSVGFREYIDTFDGYSFKYPQ 118

Query: 182 NWIPVRGAGADIFFRDPFILDENLXXXXXXXXXXXXXXVEDLGPPQVAGEKV 337
           NWI VRG+GADIFFRDPF+LDENL              VEDLG PQ AG+KV
Sbjct: 119 NWIQVRGSGADIFFRDPFVLDENLSVELSSPSSSRYKSVEDLGQPQEAGKKV 170


>emb|CBI39622.3| unnamed protein product [Vitis vinifera]
          Length = 248

 Score =  129 bits (323), Expect = 3e-28
 Identities = 68/112 (60%), Positives = 78/112 (69%), Gaps = 1/112 (0%)
 Frame = +2

Query: 5   TCRVQHHKASKVPRRNMLALMLSSVILQD-GSCDNALAQPSVAFREYIDSFDGYSFKYPQ 181
           +C++Q  K   V RR+ +AL+ SS I    G  D ALAQPSV FREYID+FDGYSFKYPQ
Sbjct: 25  SCQLQTTKGFAVLRRDAMALIFSSYIFSRVGLHDVALAQPSVGFREYIDTFDGYSFKYPQ 84

Query: 182 NWIPVRGAGADIFFRDPFILDENLXXXXXXXXXXXXXXVEDLGPPQVAGEKV 337
           NWI VRG+GADIFFRDPF+LDENL              VEDLG PQ AG+KV
Sbjct: 85  NWIQVRGSGADIFFRDPFVLDENLSVELSSPSSSRYKSVEDLGQPQEAGKKV 136