BLASTX nr result

ID: Coptis23_contig00041145 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041145
         (897 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540897.1| PREDICTED: ethylene-responsive transcription...   211   2e-52
ref|XP_003526286.1| PREDICTED: ethylene-responsive transcription...   207   3e-51
ref|XP_002267468.1| PREDICTED: ethylene-responsive transcription...   206   8e-51
ref|XP_002517949.1| conserved hypothetical protein [Ricinus comm...   204   2e-50
ref|XP_002319909.1| AP2/ERF domain-containing transcription fact...   199   7e-49

>ref|XP_003540897.1| PREDICTED: ethylene-responsive transcription factor ERF053-like
           [Glycine max]
          Length = 406

 Score =  211 bits (537), Expect = 2e-52
 Identities = 120/245 (48%), Positives = 146/245 (59%), Gaps = 8/245 (3%)
 Frame = +3

Query: 30  QQQWKPVFEEASISPRPLKKTKSPERQTNHXXXXXXXXXXXXXXXXXXXRLIFPFSYDGX 209
           ++QWKPVF++AS+S RPLKK +SPE + N                    R++FPF+++G 
Sbjct: 43  RRQWKPVFDDASVSHRPLKKIRSPEPE-NPNQQQQQQPSSMLSLQPPSSRIVFPFAFEGS 101

Query: 210 XXXXXXXXXXXXXXXXXXXXXXXXXXXMISFAANQH-GYSPXXXXXXXXXXXXXXX---- 374
                                      MISF  +Q+ GY P                   
Sbjct: 102 QHPMPFPHPFGTTNLPLFRPPLHPTQQMISFLPSQNMGYPPFLAPESTMPHEHQQHHHQQ 161

Query: 375 ---YWSDTLHLSPRGKMMMMNRLGQDGRAMLKNPMPYTSTSTKLYRGVRQRHWGKWVAEI 545
              YWSD L+LSPRG+MMMMNR   +GR ML+ P      +TKLYRGVRQRHWGKWVAEI
Sbjct: 162 LLQYWSDALNLSPRGRMMMMNRT--EGRQMLR-PQAQPLNATKLYRGVRQRHWGKWVAEI 218

Query: 546 RLPRNRTRLWLGTFDTAEDAALAYDREAFKLRGENARLNFPHLFLGRNSSEQAAATTVPP 725
           RLPRNRTRLWLGTFDTAEDAA+AYDREAFKLRGENA+LNFP LFL ++ +EQ  +TT P 
Sbjct: 219 RLPRNRTRLWLGTFDTAEDAAMAYDREAFKLRGENAKLNFPELFLNKDKAEQ--STTAPA 276

Query: 726 RTSQE 740
            +S E
Sbjct: 277 SSSNE 281


>ref|XP_003526286.1| PREDICTED: ethylene-responsive transcription factor ERF054-like
           [Glycine max]
          Length = 415

 Score =  207 bits (527), Expect = 3e-51
 Identities = 120/247 (48%), Positives = 147/247 (59%), Gaps = 12/247 (4%)
 Frame = +3

Query: 30  QQQWKPVFEEASISPRPLKKTKSPERQTNHXXXXXXXXXXXXXXXXXXXRLIFPFSYDGX 209
           ++QWKPVF++AS+S RPLKK +SPER+ N                    R++FPF+++G 
Sbjct: 44  RRQWKPVFDDASLSHRPLKKIRSPERE-NPNQQQQQPPSSMLSLQPPSSRIVFPFAFEGS 102

Query: 210 XXXXXXXXXXXXXXXXXXXXXXXXXXXMISFAANQH-GYSPXXXXXXXXXXXXXXX---- 374
                                      MISF + Q+ GY P                   
Sbjct: 103 QHPMPFPHPFGTTNLPLFRPNLHPTQQMISFGSQQNMGYPPFLAPESTMPHQHQQHLQQH 162

Query: 375 ------YWSDTLHLSPRGKMMMM-NRLGQDGRAMLKNPMPYTSTSTKLYRGVRQRHWGKW 533
                 YWSD ++LSPRG+MMMM NR   +GR ML+ P      +TKLYRGVRQRHWGKW
Sbjct: 163 HQQLLHYWSDAINLSPRGRMMMMMNRT--EGRQMLR-PQAQPLNATKLYRGVRQRHWGKW 219

Query: 534 VAEIRLPRNRTRLWLGTFDTAEDAALAYDREAFKLRGENARLNFPHLFLGRNSSEQAAAT 713
           VAEIRLPRNRTRLWLGTFDTAEDAA+AYDREAFKLRGENA+LNFP LFL ++ +EQ  +T
Sbjct: 220 VAEIRLPRNRTRLWLGTFDTAEDAAMAYDREAFKLRGENAKLNFPELFLNKDKAEQ--ST 277

Query: 714 TVPPRTS 734
           TV P +S
Sbjct: 278 TVAPASS 284


>ref|XP_002267468.1| PREDICTED: ethylene-responsive transcription factor ERF054-like
           [Vitis vinifera]
          Length = 465

 Score =  206 bits (523), Expect = 8e-51
 Identities = 126/271 (46%), Positives = 146/271 (53%), Gaps = 29/271 (10%)
 Frame = +3

Query: 18  SVERQQQWKPVFEEASISPRPLKKTKSPERQTNHXXXXXXXXXXXXXXXXXXX------- 176
           S+ER+Q WKPVF EAS+S RPLKK +SPER+ +                           
Sbjct: 34  SLERRQ-WKPVFGEASMSNRPLKKIRSPERRDSSLSSSSSSLAYQPPSPSLPSTVSASSA 92

Query: 177 ---------RLIFPFSYDGXXXXXXXXXXXXXXXXXXXXXXXXXXXX----MISFAANQH 317
                    R++FPF++DG                                MISFA   H
Sbjct: 93  ACLNLPPSSRIVFPFAFDGSQQMEIPQQFRTAPLAMFPPPPMQRTSQNQQQMISFAPQHH 152

Query: 318 -------GYSPXXXXXXXXXXXXXXXYWSDTLHLSPRGKMMMMNRLGQDGRAMLKNPMPY 476
                   +                 YWSD L+LSPRG+MMMMNRL QDGR   +   P 
Sbjct: 153 HSMASYPAFLAGDSGLQQQQQQQLLQYWSDALNLSPRGRMMMMNRLNQDGRNFFRPQAPP 212

Query: 477 TSTSTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAALAYDREAFKLRGENAR 656
            ST TKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAALAYDREAFKLRGENAR
Sbjct: 213 IST-TKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAALAYDREAFKLRGENAR 271

Query: 657 LNFPHLFLGRNSSEQAA--ATTVPPRTSQEN 743
           LNFP LFL ++ +   A  +++  P T  EN
Sbjct: 272 LNFPELFLNKDKAGSTAPSSSSSSPPTPHEN 302


>ref|XP_002517949.1| conserved hypothetical protein [Ricinus communis]
           gi|223542931|gb|EEF44467.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 426

 Score =  204 bits (519), Expect = 2e-50
 Identities = 122/252 (48%), Positives = 139/252 (55%), Gaps = 21/252 (8%)
 Frame = +3

Query: 24  ERQQQWKPVFEEASISP--RPLKKTKSPERQ----------------TNHXXXXXXXXXX 149
           ERQQQWKPVF EAS++   RPLKK +SPERQ                +            
Sbjct: 38  ERQQQWKPVFGEASMAADNRPLKKIRSPERQDPIHVSSSLAHRSTPFSVPSTVSSISTLP 97

Query: 150 XXXXXXXXXRLIFPFSYDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXMISFAANQHGYSP 329
                    RL FPF+++G                            MISFA NQ    P
Sbjct: 98  LNPPSSSGSRLSFPFAFEGQLPHQFTTNTCLPYFRHPLHNQQQQQ--MISFAQNQQLAMP 155

Query: 330 XXXXXXXXXXXXXXX---YWSDTLHLSPRGKMMMMNRLGQDGRAMLKNPMPYTSTSTKLY 500
                             YWSD L+LSPRG+MMMMNRLG DGR +   P+   +T TKLY
Sbjct: 156 SDSSPSALTYQQQQQLYQYWSDALNLSPRGRMMMMNRLGADGRPLFSQPIQPINT-TKLY 214

Query: 501 RGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAALAYDREAFKLRGENARLNFPHLFL 680
           RGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAA+AYDREAF+LRGENARLNFP LFL
Sbjct: 215 RGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAAMAYDREAFRLRGENARLNFPELFL 274

Query: 681 GRNSSEQAAATT 716
            +  +   +  T
Sbjct: 275 NKEKTNPTSPQT 286


>ref|XP_002319909.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|148372108|gb|ABQ62985.1| RAP2-like
           protein [Populus trichocarpa]
           gi|222858285|gb|EEE95832.1| AP2/ERF domain-containing
           transcription factor [Populus trichocarpa]
          Length = 469

 Score =  199 bits (506), Expect = 7e-49
 Identities = 124/275 (45%), Positives = 145/275 (52%), Gaps = 36/275 (13%)
 Frame = +3

Query: 30  QQQWKPVFEEASISPRPLKKTKSPERQTN----------------------HXXXXXXXX 143
           ++QWKPVF EAS+  RPLKK  SPERQ                                 
Sbjct: 43  RRQWKPVFGEASLMDRPLKKICSPERQEQIQSSASLAHQLPSCFSVSSSSASTLSLYPPS 102

Query: 144 XXXXXXXXXXXRLIFPFSYDGXXXXXXXXXXXXXXXXXXXXXXXXXXXX----MISFAAN 311
                      RL+FPF+++G                                MISF  N
Sbjct: 103 SSPSPMSSSSSRLVFPFAFEGSNQPIQCPQQFRTNPSLPIFHPLSQVAQNQQQMISFGQN 162

Query: 312 Q-HG--YSPXXXXXXXXXXXXXXX-----YWSDTLHLSPRGKMMMMNRLGQDGRAMLKNP 467
           Q HG  Y P                    YWSD L+LSPRG+MMMMN+LG DGR + + P
Sbjct: 163 QQHGIAYPPFYAGGLPMADHHHHQQQLFQYWSDALNLSPRGRMMMMNKLGPDGRPLFRPP 222

Query: 468 MPYTSTSTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAALAYDREAFKLRGE 647
           +   +T  KLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAALAYDREAFKLRGE
Sbjct: 223 IQPINTR-KLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAALAYDREAFKLRGE 281

Query: 648 NARLNFPHLFLGRNSSEQAA--ATTVPPRTSQENV 746
           NARLNFP LFL ++ +   A  +T   P TS +++
Sbjct: 282 NARLNFPELFLNKDKATSTAPSSTVSSPPTSNQSL 316


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