BLASTX nr result

ID: Coptis23_contig00041138 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041138
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262895.2| PREDICTED: uncharacterized protein L728-like...   108   6e-22
emb|CBI38184.3| unnamed protein product [Vitis vinifera]              108   6e-22
ref|XP_004172720.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   100   2e-19
ref|XP_004144675.1| PREDICTED: uncharacterized protein L728-like...   100   2e-19
ref|XP_002304655.1| predicted protein [Populus trichocarpa] gi|2...    98   6e-19

>ref|XP_002262895.2| PREDICTED: uncharacterized protein L728-like isoform 1 [Vitis
           vinifera]
          Length = 647

 Score =  108 bits (269), Expect = 6e-22
 Identities = 54/89 (60%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
 Frame = -1

Query: 260 PELVNGI---HPSSSSSKAGDDFMDLMVENFNKTKHAVNPRMGYTETNSPTFKSTGNPCL 90
           PEL  G     P    +  GD FMDLMV NFN  +    P MGYTE  S TF S+GNPCL
Sbjct: 15  PELRRGASMHQPQDPPAATGDAFMDLMVANFNSARVLPKPPMGYTENASATFLSSGNPCL 74

Query: 89  DFFFHVVPDTPPESLTKLLELAWKHNDLT 3
           DFFFHVVPDTPPE L + LELAW HN LT
Sbjct: 75  DFFFHVVPDTPPEVLKQRLELAWSHNPLT 103


>emb|CBI38184.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score =  108 bits (269), Expect = 6e-22
 Identities = 54/89 (60%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
 Frame = -1

Query: 260 PELVNGI---HPSSSSSKAGDDFMDLMVENFNKTKHAVNPRMGYTETNSPTFKSTGNPCL 90
           PEL  G     P    +  GD FMDLMV NFN  +    P MGYTE  S TF S+GNPCL
Sbjct: 34  PELRRGASMHQPQDPPAATGDAFMDLMVANFNSARVLPKPPMGYTENASATFLSSGNPCL 93

Query: 89  DFFFHVVPDTPPESLTKLLELAWKHNDLT 3
           DFFFHVVPDTPPE L + LELAW HN LT
Sbjct: 94  DFFFHVVPDTPPEVLKQRLELAWSHNPLT 122


>ref|XP_004172720.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein L728-like
           [Cucumis sativus]
          Length = 638

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 52/89 (58%), Positives = 59/89 (66%), Gaps = 4/89 (4%)
 Frame = -1

Query: 260 PELVNGIHPSS----SSSKAGDDFMDLMVENFNKTKHAVNPRMGYTETNSPTFKSTGNPC 93
           PEL +   P S     S+ +GD F+D MV NFNKT  ++ P MG+TE  S TF STGNPC
Sbjct: 10  PELYHAAAPVSLQPTESTPSGDPFVDAMVANFNKTDDSLPP-MGFTENMSATFLSTGNPC 68

Query: 92  LDFFFHVVPDTPPESLTKLLELAWKHNDL 6
           LDFFFHVVPDTP  SL   L LAW HN L
Sbjct: 69  LDFFFHVVPDTPASSLIDRLSLAWNHNPL 97


>ref|XP_004144675.1| PREDICTED: uncharacterized protein L728-like [Cucumis sativus]
          Length = 638

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 52/89 (58%), Positives = 59/89 (66%), Gaps = 4/89 (4%)
 Frame = -1

Query: 260 PELVNGIHPSS----SSSKAGDDFMDLMVENFNKTKHAVNPRMGYTETNSPTFKSTGNPC 93
           PEL +   P S     S+ +GD F+D MV NFNKT  ++ P MG+TE  S TF STGNPC
Sbjct: 10  PELYHAAAPVSLQPTESTPSGDPFVDAMVANFNKTDDSLPP-MGFTENMSATFLSTGNPC 68

Query: 92  LDFFFHVVPDTPPESLTKLLELAWKHNDL 6
           LDFFFHVVPDTP  SL   L LAW HN L
Sbjct: 69  LDFFFHVVPDTPANSLIDRLSLAWNHNPL 97


>ref|XP_002304655.1| predicted protein [Populus trichocarpa] gi|222842087|gb|EEE79634.1|
           predicted protein [Populus trichocarpa]
          Length = 651

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 46/67 (68%), Positives = 51/67 (76%)
 Frame = -1

Query: 203 FMDLMVENFNKTKHAVNPRMGYTETNSPTFKSTGNPCLDFFFHVVPDTPPESLTKLLELA 24
           F+DLMV+NFNKT     P+MGYTE  S TF S+GNPCLD FFHVVP+TPPESL K L  A
Sbjct: 31  FVDLMVDNFNKTTVNQLPQMGYTENMSATFLSSGNPCLDLFFHVVPNTPPESLQKRLHSA 90

Query: 23  WKHNDLT 3
           W HN LT
Sbjct: 91  WNHNPLT 97


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