BLASTX nr result

ID: Coptis23_contig00041124 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041124
         (522 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527242.1| kinase, putative [Ricinus communis] gi|22353...   124   6e-27
ref|XP_003635251.1| PREDICTED: L-type lectin-domain containing r...   122   3e-26
emb|CBI33190.3| unnamed protein product [Vitis vinifera]              122   3e-26
ref|XP_002310341.1| predicted protein [Populus trichocarpa] gi|2...   117   8e-25
ref|XP_002518350.1| kinase, putative [Ricinus communis] gi|22354...   115   3e-24

>ref|XP_002527242.1| kinase, putative [Ricinus communis] gi|223533418|gb|EEF35168.1|
           kinase, putative [Ricinus communis]
          Length = 637

 Score =  124 bits (312), Expect = 6e-27
 Identities = 70/162 (43%), Positives = 94/162 (58%), Gaps = 1/162 (0%)
 Frame = -2

Query: 521 SSTTNLSVYLTFAQNPVFGGHYILSYAVDLKNILPEWINVGFSAATGASYELHNILSWDF 342
           S+T NLSV+LT+A+NPVF G+  LSY +DL++ LPEW+ VGFSA+TG+  E+HNILSW+F
Sbjct: 163 STTKNLSVFLTYAKNPVFSGNSSLSYIIDLRDFLPEWVRVGFSASTGSWVEIHNILSWNF 222

Query: 341 NSTELPSSLAVTIRXXXXXXXXXXXGREDKRNIKXXXXXXXXXXXXXXXXXXVFFV-WRE 165
            ST                       R+ K                      + FV WR+
Sbjct: 223 TST-------------------LEINRKTKSKTSLVVGLASGSVLLASGIGVLCFVYWRK 263

Query: 164 RSNQKKDEEDVLDISTDEDYEKGTGPKRFNYGELARATSNFT 39
           RS    +EE+++D S D+++EKGTGPKRF Y EL  ATSNF+
Sbjct: 264 RSG-GGNEEEIVDGSMDDEFEKGTGPKRFTYRELTHATSNFS 304


>ref|XP_003635251.1| PREDICTED: L-type lectin-domain containing receptor kinase
           IX.1-like [Vitis vinifera]
          Length = 957

 Score =  122 bits (306), Expect = 3e-26
 Identities = 65/161 (40%), Positives = 88/161 (54%)
 Frame = -2

Query: 521 SSTTNLSVYLTFAQNPVFGGHYILSYAVDLKNILPEWINVGFSAATGASYELHNILSWDF 342
           S+T NLSV+LT+A NPVF G+  LSY VDL  +LPEWI VGFSAATG S ELH + SW+F
Sbjct: 474 SATKNLSVFLTYADNPVFSGNSTLSYVVDLTKVLPEWIRVGFSAATGESIELHTVYSWEF 533

Query: 341 NSTELPSSLAVTIRXXXXXXXXXXXGREDKRNIKXXXXXXXXXXXXXXXXXXVFFVWRER 162
            ST   S                    + K++                     +F+W  +
Sbjct: 534 ESTLEASG------------------GKGKKSFGLVVALVVTIGVLTCGSGGYWFIWWRK 575

Query: 161 SNQKKDEEDVLDISTDEDYEKGTGPKRFNYGELARATSNFT 39
               + E+  L+++ D+++EKGTGPKRF Y EL+ AT NF+
Sbjct: 576 RVGPRKEDMALELAIDDEFEKGTGPKRFTYRELSHATKNFS 616



 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 42/63 (66%), Positives = 49/63 (77%)
 Frame = -2

Query: 521 SSTTNLSVYLTFAQNPVFGGHYILSYAVDLKNILPEWINVGFSAATGASYELHNILSWDF 342
           S+T NLSV+LT+A NPVF G+  LSY VDL  +LPEWI VGFSAATG S ELH + SW+F
Sbjct: 211 SATKNLSVFLTYADNPVFSGNSTLSYVVDLTKVLPEWIRVGFSAATGESIELHTVYSWEF 270

Query: 341 NST 333
            ST
Sbjct: 271 EST 273


>emb|CBI33190.3| unnamed protein product [Vitis vinifera]
          Length = 597

 Score =  122 bits (306), Expect = 3e-26
 Identities = 65/161 (40%), Positives = 88/161 (54%)
 Frame = -2

Query: 521 SSTTNLSVYLTFAQNPVFGGHYILSYAVDLKNILPEWINVGFSAATGASYELHNILSWDF 342
           S+T NLSV+LT+A NPVF G+  LSY VDL  +LPEWI VGFSAATG S ELH + SW+F
Sbjct: 242 SATKNLSVFLTYADNPVFSGNSTLSYVVDLTKVLPEWIRVGFSAATGESIELHTVYSWEF 301

Query: 341 NSTELPSSLAVTIRXXXXXXXXXXXGREDKRNIKXXXXXXXXXXXXXXXXXXVFFVWRER 162
            ST   S                    + K++                     +F+W  +
Sbjct: 302 ESTLEASG------------------GKGKKSFGLVVALVVTIGVLTCGSGGYWFIWWRK 343

Query: 161 SNQKKDEEDVLDISTDEDYEKGTGPKRFNYGELARATSNFT 39
               + E+  L+++ D+++EKGTGPKRF Y EL+ AT NF+
Sbjct: 344 RVGPRKEDMALELAIDDEFEKGTGPKRFTYRELSHATKNFS 384



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
 Frame = -2

Query: 521 SSTTNLSVYLTFAQNPVFGGHYILSYAVDLKNILPEWINV---GFSAATGASYELHNILS 351
           S+T NLSV+LT+A NPVF G+  LSY VDL  +LPEWI V     +++TG +     +  
Sbjct: 64  SATKNLSVFLTYADNPVFSGNSTLSYVVDLTKVLPEWIRVVDDSLTSSTGRASYAEPVRL 123

Query: 350 WDFNSTEL 327
           WD ++  L
Sbjct: 124 WDASTGRL 131


>ref|XP_002310341.1| predicted protein [Populus trichocarpa] gi|222853244|gb|EEE90791.1|
           predicted protein [Populus trichocarpa]
          Length = 692

 Score =  117 bits (294), Expect = 8e-25
 Identities = 64/163 (39%), Positives = 89/163 (54%), Gaps = 3/163 (1%)
 Frame = -2

Query: 521 SSTTNLSVYLTFAQNPVFGGHYILSYAVDLKNILPEWINVGFSAATGASYELHNILSWDF 342
           S+T NLSV+LT+A+NP FGG+  L Y +DL+  LPEW+ +GFSA+TG   E+HNILSW F
Sbjct: 207 STTKNLSVFLTYAENPEFGGNSTLHYIIDLREFLPEWVRIGFSASTGDWVEIHNILSWTF 266

Query: 341 NSTELPSSLAVTIRXXXXXXXXXXXGREDKRN---IKXXXXXXXXXXXXXXXXXXVFFVW 171
                 SSL V+                DK+    +                       W
Sbjct: 267 E-----SSLEVS----------------DKKKTGLVVGLAVGIGVLTTFGIGVLCFVLCW 305

Query: 170 RERSNQKKDEEDVLDISTDEDYEKGTGPKRFNYGELARATSNF 42
           R+   + + + + +D+S D+++EKGTGPKRF Y EL RAT+NF
Sbjct: 306 RKNRTRCEKDNEAIDVSMDDEFEKGTGPKRFTYRELIRATNNF 348


>ref|XP_002518350.1| kinase, putative [Ricinus communis] gi|223542570|gb|EEF44110.1|
           kinase, putative [Ricinus communis]
          Length = 668

 Score =  115 bits (289), Expect = 3e-24
 Identities = 66/166 (39%), Positives = 91/166 (54%), Gaps = 5/166 (3%)
 Frame = -2

Query: 521 SSTTNLSVYLTFAQNPVFGGHYILSYAVDLKNILPEWINVGFSAATGASYELHNILSWDF 342
           S T NLS++LT+A NPVF G+  LSY +DL  +LPE++ VGFSA+TG   E+HNILSW+F
Sbjct: 211 SQTRNLSMFLTYADNPVFNGNSSLSYEIDLSKVLPEFVTVGFSASTGFRTEIHNILSWEF 270

Query: 341 NSTELPSSLAVTIRXXXXXXXXXXXGREDKRNIKXXXXXXXXXXXXXXXXXXVFFVWRER 162
           NSTE+ +   V                    NI                   V   +  R
Sbjct: 271 NSTEISTKPDVGTGGGGG------------NNIGLIVGCVIGGLAVVGGLFSVLVFYGRR 318

Query: 161 SNQKKDEED-----VLDISTDEDYEKGTGPKRFNYGELARATSNFT 39
           +  KKD++D       D S D ++++GTGPKRF+Y EL +AT+NF+
Sbjct: 319 NKGKKDDDDDDDDAATDDSMDHEFQQGTGPKRFSYKELVQATNNFS 364


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