BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041120
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_006280924.1| NADH dehydrogenase subunit 4 (mitochondrion)...   140   8e-59
ref|YP_006291798.1| nad4 gene product (mitochondrion) [Daucus ca...   144   2e-58
ref|YP_002608215.2| NADH dehydrogenase subunit 4 [Carica papaya]...   142   2e-56
ref|YP_006460174.1| NADH dehydrogenase subunit 4 (mitochondrion)...   144   3e-56
dbj|BAD66789.1| NADH dehydrogenase subunit 4 [Beta vulgaris subs...   142   3e-56

>ref|YP_006280924.1| NADH dehydrogenase subunit 4 (mitochondrion) [Spirodela polyrhiza]
           gi|385252625|gb|AFI54933.1| NADH dehydrogenase subunit 4
           (mitochondrion) [Spirodela polyrhiza]
          Length = 493

 Score =  140 bits (354), Expect(2) = 8e-59
 Identities = 73/82 (89%), Positives = 77/82 (93%)
 Frame = +3

Query: 258 SLPFSSFSLANMSSPGTSSFIGEFLILVGAFQRNSLVATLAALGMILGAAYSLWLYNRVV 437
           ++ FSS +LANMSSPGTSSFIGEF ILVGAFQRNSLVATLAALGMILGAAYSLWLYNR V
Sbjct: 377 TISFSS-TLANMSSPGTSSFIGEFPILVGAFQRNSLVATLAALGMILGAAYSLWLYNRAV 435

Query: 438 SGNLKPDFLHKFSDLNGREVSL 503
           SGNLKPDFLHKFSD NGREVS+
Sbjct: 436 SGNLKPDFLHKFSDPNGREVSI 457



 Score =  111 bits (278), Expect(2) = 8e-59
 Identities = 54/60 (90%), Positives = 55/60 (91%)
 Frame = +2

Query: 104 SNIQGIGGSIPPMSSHGPVPPALFLCVGVIYDRHKTGLARYYGGSVSTMPNLSTIFFFFT 283
           SNIQGIGGSI PMSSHGPVPPALFLCVGV+YDRHKT LARYYGGSVSTMPNLSTI F  T
Sbjct: 324 SNIQGIGGSILPMSSHGPVPPALFLCVGVLYDRHKTRLARYYGGSVSTMPNLSTISFSST 383


>ref|YP_006291798.1| nad4 gene product (mitochondrion) [Daucus carota subsp. sativus]
           gi|374082014|gb|AEY81206.1| NADH dehydrogenase subunit 4
           (mitochondrion) [Daucus carota subsp. sativus]
          Length = 495

 Score =  144 bits (363), Expect(2) = 2e-58
 Identities = 73/79 (92%), Positives = 75/79 (94%)
 Frame = +3

Query: 267 FSSFSLANMSSPGTSSFIGEFLILVGAFQRNSLVATLAALGMILGAAYSLWLYNRVVSGN 446
           F S +LANMSSPGTSSFIGEFLILVGAFQRNSLVATLAALGMILGAAYSLWLYNR VSGN
Sbjct: 381 FFSSTLANMSSPGTSSFIGEFLILVGAFQRNSLVATLAALGMILGAAYSLWLYNRAVSGN 440

Query: 447 LKPDFLHKFSDLNGREVSL 503
           LKPDFLHKFSD NGREVS+
Sbjct: 441 LKPDFLHKFSDPNGREVSI 459



 Score =  106 bits (265), Expect(2) = 2e-58
 Identities = 51/59 (86%), Positives = 52/59 (88%)
 Frame = +2

Query: 107 NIQGIGGSIPPMSSHGPVPPALFLCVGVIYDRHKTGLARYYGGSVSTMPNLSTIFFFFT 283
           NIQGIGGSIPPMSSHG VP ALFLCVGV+YDRHKT L RYYGGSVSTMPNL TIFF  T
Sbjct: 327 NIQGIGGSIPPMSSHGLVPSALFLCVGVLYDRHKTRLVRYYGGSVSTMPNLPTIFFSST 385


>ref|YP_002608215.2| NADH dehydrogenase subunit 4 [Carica papaya]
           gi|256535772|gb|ACB20504.2| NADH dehydrogenase subunit 4
           (mitochondrion) [Carica papaya]
          Length = 495

 Score =  142 bits (359), Expect(2) = 2e-56
 Identities = 72/77 (93%), Positives = 74/77 (96%)
 Frame = +3

Query: 273 SFSLANMSSPGTSSFIGEFLILVGAFQRNSLVATLAALGMILGAAYSLWLYNRVVSGNLK 452
           S +LANMSSPGTSSFIGEF ILVGAFQRNSLVATLAALGMILGAAYSLWLYNRVVSGNLK
Sbjct: 383 SLTLANMSSPGTSSFIGEFPILVGAFQRNSLVATLAALGMILGAAYSLWLYNRVVSGNLK 442

Query: 453 PDFLHKFSDLNGREVSL 503
           PDFLHKFSD NGREVS+
Sbjct: 443 PDFLHKFSDSNGREVSI 459



 Score =  101 bits (252), Expect(2) = 2e-56
 Identities = 49/59 (83%), Positives = 50/59 (84%)
 Frame = +2

Query: 107 NIQGIGGSIPPMSSHGPVPPALFLCVGVIYDRHKTGLARYYGGSVSTMPNLSTIFFFFT 283
           NIQGIGGSIPPM SHG VP ALFLCVGV+YDRHKT L RYYGG VSTMPNLSTI F  T
Sbjct: 327 NIQGIGGSIPPMLSHGLVPSALFLCVGVLYDRHKTRLVRYYGGLVSTMPNLSTISFSLT 385


>ref|YP_006460174.1| NADH dehydrogenase subunit 4 (mitochondrion) [Mimulus guttatus]
           gi|340007657|gb|AEK26521.1| NADH dehydrogenase subunit 4
           (mitochondrion) [Mimulus guttatus]
          Length = 492

 Score =  144 bits (363), Expect(2) = 3e-56
 Identities = 73/79 (92%), Positives = 75/79 (94%)
 Frame = +3

Query: 267 FSSFSLANMSSPGTSSFIGEFLILVGAFQRNSLVATLAALGMILGAAYSLWLYNRVVSGN 446
           F S +LANMSSPGTSSFIGEFLILVGAFQRNSLVATLAALGMILGAAYSLWLYNR VSGN
Sbjct: 378 FFSSTLANMSSPGTSSFIGEFLILVGAFQRNSLVATLAALGMILGAAYSLWLYNRAVSGN 437

Query: 447 LKPDFLHKFSDLNGREVSL 503
           LKPDFLHKFSD NGREVS+
Sbjct: 438 LKPDFLHKFSDPNGREVSI 456



 Score = 99.8 bits (247), Expect(2) = 3e-56
 Identities = 49/59 (83%), Positives = 50/59 (84%)
 Frame = +2

Query: 107 NIQGIGGSIPPMSSHGPVPPALFLCVGVIYDRHKTGLARYYGGSVSTMPNLSTIFFFFT 283
           NIQGIGGSI PMSSHG V  ALFLCVGV+YDRHKT L RYYGGSVSTMPNL TIFF  T
Sbjct: 324 NIQGIGGSILPMSSHGLVSSALFLCVGVLYDRHKTRLVRYYGGSVSTMPNLPTIFFSST 382


>dbj|BAD66789.1| NADH dehydrogenase subunit 4 [Beta vulgaris subsp. vulgaris]
          Length = 477

 Score =  142 bits (357), Expect(2) = 3e-56
 Identities = 72/77 (93%), Positives = 73/77 (94%)
 Frame = +3

Query: 267 FSSFSLANMSSPGTSSFIGEFLILVGAFQRNSLVATLAALGMILGAAYSLWLYNRVVSGN 446
           F  F+LANMS PGTSSFIGEFLILVGAFQRNSLVATLAALGMILGAAYSLWLYNRVVSGN
Sbjct: 363 FFFFTLANMSLPGTSSFIGEFLILVGAFQRNSLVATLAALGMILGAAYSLWLYNRVVSGN 422

Query: 447 LKPDFLHKFSDLNGREV 497
           LKPDFLHKFSD NGREV
Sbjct: 423 LKPDFLHKFSDPNGREV 439



 Score =  101 bits (252), Expect(2) = 3e-56
 Identities = 49/59 (83%), Positives = 50/59 (84%)
 Frame = +2

Query: 107 NIQGIGGSIPPMSSHGPVPPALFLCVGVIYDRHKTGLARYYGGSVSTMPNLSTIFFFFT 283
           NIQGIGGSI PM SHG V  ALFLCVGV+YDRHKT L RYYGG VSTMPN STIFFFFT
Sbjct: 309 NIQGIGGSILPMLSHGLVSSALFLCVGVLYDRHKTRLVRYYGGLVSTMPNFSTIFFFFT 367