BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041113
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76007.1| hypothetical protein VITISV_013341 [Vitis vinifera]   155   2e-36
ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250...   100   2e-19
ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat...    99   3e-19
emb|CBI23791.3| unnamed protein product [Vitis vinifera]               99   3e-19
ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containi...    98   6e-19

>emb|CAN76007.1| hypothetical protein VITISV_013341 [Vitis vinifera]
          Length = 666

 Score =  155 bits (393), Expect = 2e-36
 Identities = 76/146 (52%), Positives = 98/146 (67%)
 Frame = +2

Query: 2   KFCTSLPFPLHQGKSLHAQTIKSGFVESDGYVLNSLITMYAQCDLLFNARRVFDGISVPN 181
           K  +S   PL   + LHA   K GFV SD +V N L+T+Y++C    +AR++FD I VP 
Sbjct: 44  KCLSSSQSPLLHAQPLHADAAKRGFVSSDPFVTNDLLTVYSRCGSPQSARKMFDEIPVPG 103

Query: 182 LVNWNTIISSFFRAGECDGAREIFDRMRGIQYPNDITWSAMISGYTQNYQAKEALCAFKQ 361
              WNT+IS +FR   C  ARE+FDRMR     ND+TWSA+I+GY QN + K+AL  FK+
Sbjct: 104 PFCWNTMISCYFRESHCGAARELFDRMREAHLANDVTWSAVIAGYAQNSRPKDALFVFKE 163

Query: 362 MRGECNELGIGLSPNGYTIASVFSAC 439
           MRGEC+E+G  LSP  +TI SVFSAC
Sbjct: 164 MRGECDEMGSPLSPMSHTITSVFSAC 189


>ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
          Length = 1130

 Score =  100 bits (248), Expect = 2e-19
 Identities = 61/141 (43%), Positives = 88/141 (62%), Gaps = 1/141 (0%)
 Frame = +2

Query: 20  PFPLHQGKSLHAQTIKSGFVESDGYVLNSLITMYAQCDLLFNARRVFDGISVPNLVNWNT 199
           P  LH G+S+HAQ ++ G    D +V  SLI+MY+ C  L  AR+VFD I  P+L +WN+
Sbjct: 77  PSLLHLGRSVHAQILRFGLA-IDPFVQTSLISMYSSCGNLGFARQVFDEIPQPDLPSWNS 135

Query: 200 IISSFFRAGECDGAREIFDRMRGIQYPNDITWSAMISGYTQNYQAKEALCAFKQMRGECN 379
           II++ F+AG  D AR +F  M      N I+WS MI+GY +  Q KEAL  F++M+    
Sbjct: 136 IINANFQAGLVDMARNLFAVM---PERNVISWSCMINGYVRCGQYKEALALFREMQ---- 188

Query: 380 ELGIG-LSPNGYTIASVFSAC 439
            LG+  + PN +T++ V +AC
Sbjct: 189 MLGVNDVRPNEFTMSGVLAAC 209


>ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 689

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 53/134 (39%), Positives = 86/134 (64%)
 Frame = +2

Query: 38  GKSLHAQTIKSGFVESDGYVLNSLITMYAQCDLLFNARRVFDGISVPNLVNWNTIISSFF 217
           G+ +H Q ++ G +E D YV  SLI MY +C ++ +AR++FD + V ++ +WN +I+ + 
Sbjct: 200 GRCVHGQGLRVG-LEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYM 258

Query: 218 RAGECDGAREIFDRMRGIQYPNDITWSAMISGYTQNYQAKEALCAFKQMRGECNELGIGL 397
           + GE   A ++F+RM   ++ N ++W+AMISGYTQN  A++AL  F +M  + +E    +
Sbjct: 259 KEGEIGVAEDLFERM---EHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSE----M 311

Query: 398 SPNGYTIASVFSAC 439
            PN  TI SV  AC
Sbjct: 312 KPNWVTIVSVLPAC 325


>emb|CBI23791.3| unnamed protein product [Vitis vinifera]
          Length = 615

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 53/134 (39%), Positives = 86/134 (64%)
 Frame = +2

Query: 38  GKSLHAQTIKSGFVESDGYVLNSLITMYAQCDLLFNARRVFDGISVPNLVNWNTIISSFF 217
           G+ +H Q ++ G +E D YV  SLI MY +C ++ +AR++FD + V ++ +WN +I+ + 
Sbjct: 126 GRCVHGQGLRVG-LEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYM 184

Query: 218 RAGECDGAREIFDRMRGIQYPNDITWSAMISGYTQNYQAKEALCAFKQMRGECNELGIGL 397
           + GE   A ++F+RM   ++ N ++W+AMISGYTQN  A++AL  F +M  + +E    +
Sbjct: 185 KEGEIGVAEDLFERM---EHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSE----M 237

Query: 398 SPNGYTIASVFSAC 439
            PN  TI SV  AC
Sbjct: 238 KPNWVTIVSVLPAC 251


>ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
           gi|449479088|ref|XP_004155501.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
          Length = 855

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 55/145 (37%), Positives = 86/145 (59%), Gaps = 1/145 (0%)
 Frame = +2

Query: 8   CTSLPFPLHQGKSLHAQTIKSGFVESDGYVLNSLITMYAQCDLLFNARRVFDGISVPNLV 187
           C S+ F L  GK +H  ++++G V+ D +V N+L++MYA+C  +  A +VF+GI   ++V
Sbjct: 244 CASV-FALQHGKQVHGFSVRNGLVD-DVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVV 301

Query: 188 NWNTIISSFFRAGECDGAREIFDRMRGIQYPND-ITWSAMISGYTQNYQAKEALCAFKQM 364
           +WN +++ + + G  D A  +F  M+      D ITWSA+I+GY Q     EAL  F+QM
Sbjct: 302 SWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQM 361

Query: 365 RGECNELGIGLSPNGYTIASVFSAC 439
           +        GL PN  T+AS+ S C
Sbjct: 362 Q------LYGLEPNVVTLASLLSGC 380