BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041112
         (605 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containi...   312   3e-83
emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]   312   3e-83
ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containi...   306   1e-81
ref|XP_002318314.1| predicted protein [Populus trichocarpa] gi|2...   305   3e-81
ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group] g...   294   7e-78

>ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein At5g16860-like
            [Vitis vinifera]
          Length = 852

 Score =  312 bits (800), Expect = 3e-83
 Identities = 149/201 (74%), Positives = 171/201 (85%)
 Frame = -1

Query: 605  GDVDAAQNVFHRMSTKNDVSWTSLMTAYGMHGRGEEALQVFNTMQKASLVPDEVTFLVVL 426
            GDVDAA+ VF  M  +N VSWTSLMT YGMHGRGEEALQ+F  MQK  LVPD VTF+VVL
Sbjct: 529  GDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVL 588

Query: 425  YACSHSGMIEKGIEYFNTMQGKYGVAPGKEHYACMVDLLGRAGRLDEAVKLIKGTPMEHS 246
            YACSHSGM+++GI YFN M   +GV PG EHYACMVDLL RAGRLDEA++LI+G PM+ +
Sbjct: 589  YACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPT 648

Query: 245  PIVWVALLSACRIHANVELGEYAAERLIELDADYDGSYTLLSNIYASAGRWKDVARIRLL 66
            P VWVALLSACR++ANVELGEYAA +L+EL++  DGSYTLLSNIYA+A  WKDVARIR L
Sbjct: 649  PAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYL 708

Query: 65   MKRTGVKKRPGCSWVQGKKGT 3
            MK TG+KKRPGCSWVQG+KGT
Sbjct: 709  MKNTGIKKRPGCSWVQGRKGT 729


>emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
          Length = 871

 Score =  312 bits (799), Expect = 3e-83
 Identities = 149/201 (74%), Positives = 171/201 (85%)
 Frame = -1

Query: 605  GDVDAAQNVFHRMSTKNDVSWTSLMTAYGMHGRGEEALQVFNTMQKASLVPDEVTFLVVL 426
            GDVDAA+ VF  M  +N VSWTSLMT YGMHGRGEEALQ+F  MQK  LVPD VTF+VVL
Sbjct: 548  GDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVL 607

Query: 425  YACSHSGMIEKGIEYFNTMQGKYGVAPGKEHYACMVDLLGRAGRLDEAVKLIKGTPMEHS 246
            YACSHSGM+++GI YFN M   +GV PG EHYACMVDLL RAGRLDEA++LI+G PM+ +
Sbjct: 608  YACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPT 667

Query: 245  PIVWVALLSACRIHANVELGEYAAERLIELDADYDGSYTLLSNIYASAGRWKDVARIRLL 66
            P VWVALLSACR++ANVELGEYAA +L+EL++  DGSYTLLSNIYA+A  WKDVARIR L
Sbjct: 668  PAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYL 727

Query: 65   MKRTGVKKRPGCSWVQGKKGT 3
            MK TG+KKRPGCSWVQG+KGT
Sbjct: 728  MKNTGIKKRPGCSWVQGRKGT 748


>ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16860-like
            [Glycine max]
          Length = 986

 Score =  306 bits (785), Expect = 1e-81
 Identities = 145/200 (72%), Positives = 168/200 (84%)
 Frame = -1

Query: 605  GDVDAAQNVFHRMSTKNDVSWTSLMTAYGMHGRGEEALQVFNTMQKASLVPDEVTFLVVL 426
            GDVD AQ VF  M  +N VSWTSLMT YGMHGRGE+AL+VF+ M+K  LVPD +TFLVVL
Sbjct: 663  GDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVL 722

Query: 425  YACSHSGMIEKGIEYFNTMQGKYGVAPGKEHYACMVDLLGRAGRLDEAVKLIKGTPMEHS 246
            YACSHSGM++ GI +FN M   +GV PG EHYACMVDL GRAGRL EA+KLI   PME +
Sbjct: 723  YACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPT 782

Query: 245  PIVWVALLSACRIHANVELGEYAAERLIELDADYDGSYTLLSNIYASAGRWKDVARIRLL 66
            P+VWVALLSACR+H+NVELGE+AA RL+EL++  DGSYTLLSNIYA+A RWKDVARIR  
Sbjct: 783  PVVWVALLSACRLHSNVELGEFAANRLLELESGNDGSYTLLSNIYANARRWKDVARIRYT 842

Query: 65   MKRTGVKKRPGCSWVQGKKG 6
            MKRTG+KKRPGCSW+QG+KG
Sbjct: 843  MKRTGIKKRPGCSWIQGRKG 862


>ref|XP_002318314.1| predicted protein [Populus trichocarpa] gi|222858987|gb|EEE96534.1|
           predicted protein [Populus trichocarpa]
          Length = 539

 Score =  305 bits (782), Expect = 3e-81
 Identities = 144/201 (71%), Positives = 175/201 (87%)
 Frame = -1

Query: 605 GDVDAAQNVFHRMSTKNDVSWTSLMTAYGMHGRGEEALQVFNTMQKASLVPDEVTFLVVL 426
           GD+D A+ VF  +  KN VSWTSLMT YGMHGRG+EAL+VF+ M++  L PD VT LVVL
Sbjct: 216 GDIDVARFVFDNLKQKNFVSWTSLMTGYGMHGRGKEALEVFDEMRRVGLQPDGVTLLVVL 275

Query: 425 YACSHSGMIEKGIEYFNTMQGKYGVAPGKEHYACMVDLLGRAGRLDEAVKLIKGTPMEHS 246
           YACSHSGMI++GIE+FN+M  ++GV PG+EHYACMVDLLGRAGRL+EA++LI+G  ME S
Sbjct: 276 YACSHSGMIDQGIEFFNSMSKEFGVIPGQEHYACMVDLLGRAGRLNEAMELIEGMQMEPS 335

Query: 245 PIVWVALLSACRIHANVELGEYAAERLIELDADYDGSYTLLSNIYASAGRWKDVARIRLL 66
            IVWVALLS CRIHANVELGE+AA++L+EL+++ DGSYTLLSNIYA+A RWKDVAR+R L
Sbjct: 336 SIVWVALLSGCRIHANVELGEHAAKQLLELNSENDGSYTLLSNIYANARRWKDVARVRSL 395

Query: 65  MKRTGVKKRPGCSWVQGKKGT 3
           MK +G++KRPGCSWVQGKKGT
Sbjct: 396 MKNSGIRKRPGCSWVQGKKGT 416


>ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
            gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza
            sativa Japonica Group]
          Length = 890

 Score =  294 bits (753), Expect = 7e-78
 Identities = 131/201 (65%), Positives = 169/201 (84%)
 Frame = -1

Query: 605  GDVDAAQNVFHRMSTKNDVSWTSLMTAYGMHGRGEEALQVFNTMQKASLVPDEVTFLVVL 426
            GDVD A++VF  MS K+ +SWTS+MT YGMHGRG EAL +F+ M+KA  VPD++TFLVVL
Sbjct: 567  GDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVL 626

Query: 425  YACSHSGMIEKGIEYFNTMQGKYGVAPGKEHYACMVDLLGRAGRLDEAVKLIKGTPMEHS 246
            YACSH GM+++G+ YF++M   YG+ P  EHYAC +DLL R+GRLD+A + +K  PME +
Sbjct: 627  YACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPT 686

Query: 245  PIVWVALLSACRIHANVELGEYAAERLIELDADYDGSYTLLSNIYASAGRWKDVARIRLL 66
             +VWVALLSACR+H+NVEL E+A  +L+E++A+ DGSYTL+SNIYA+AGRWKDVARIR L
Sbjct: 687  AVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHL 746

Query: 65   MKRTGVKKRPGCSWVQGKKGT 3
            MK++G+KKRPGCSWVQG+KGT
Sbjct: 747  MKKSGIKKRPGCSWVQGQKGT 767