BLASTX nr result

ID: Coptis23_contig00041094 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041094
         (220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW77651.1| hypothetical protein ZEAMMB73_448999 [Zea mays]         87   1e-15
gb|AFW77650.1| hypothetical protein ZEAMMB73_448999 [Zea mays]         87   1e-15
ref|XP_002269707.2| PREDICTED: putative E3 ubiquitin-protein lig...    87   1e-15
emb|CBI23000.3| unnamed protein product [Vitis vinifera]               87   1e-15
emb|CAN65866.1| hypothetical protein VITISV_010257 [Vitis vinifera]    87   1e-15

>gb|AFW77651.1| hypothetical protein ZEAMMB73_448999 [Zea mays]
          Length = 1014

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/70 (60%), Positives = 53/70 (75%)
 Frame = -3

Query: 212  INDILVYRDWLYSARGVLVEGLVLKERRKERNPQMSIPMEKGKRVQAMGVVEDFIYVNCS 33
            I+ I+VYRDW+Y A G  VEG  LK+ +K   P M++P+ KG  V+AM VVEDFIY+NCS
Sbjct: 905  ISSIVVYRDWMYCA-GAQVEGSALKDWKKRCKPNMTMPIPKGTSVEAMAVVEDFIYLNCS 963

Query: 32   LSPSIIEIWL 3
             SPSII+IWL
Sbjct: 964  RSPSIIQIWL 973


>gb|AFW77650.1| hypothetical protein ZEAMMB73_448999 [Zea mays]
          Length = 990

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/70 (60%), Positives = 53/70 (75%)
 Frame = -3

Query: 212  INDILVYRDWLYSARGVLVEGLVLKERRKERNPQMSIPMEKGKRVQAMGVVEDFIYVNCS 33
            I+ I+VYRDW+Y A G  VEG  LK+ +K   P M++P+ KG  V+AM VVEDFIY+NCS
Sbjct: 881  ISSIVVYRDWMYCA-GAQVEGSALKDWKKRCKPNMTMPIPKGTSVEAMAVVEDFIYLNCS 939

Query: 32   LSPSIIEIWL 3
             SPSII+IWL
Sbjct: 940  RSPSIIQIWL 949


>ref|XP_002269707.2| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Vitis
            vinifera]
          Length = 1339

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/72 (58%), Positives = 54/72 (75%)
 Frame = -3

Query: 218  KPINDILVYRDWLYSARGVLVEGLVLKERRKERNPQMSIPMEKGKRVQAMGVVEDFIYVN 39
            +PIN I+VY+DWLYSA  + VEG   KE ++   PQMS+  +KG  V AMG+VEDFIY+N
Sbjct: 1228 RPINSIVVYKDWLYSASDI-VEGSNFKEWKRHSKPQMSMVPDKGASVLAMGIVEDFIYLN 1286

Query: 38   CSLSPSIIEIWL 3
            CS S SI++IWL
Sbjct: 1287 CSSSTSILQIWL 1298


>emb|CBI23000.3| unnamed protein product [Vitis vinifera]
          Length = 1274

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/72 (58%), Positives = 54/72 (75%)
 Frame = -3

Query: 218  KPINDILVYRDWLYSARGVLVEGLVLKERRKERNPQMSIPMEKGKRVQAMGVVEDFIYVN 39
            +PIN I+VY+DWLYSA  + VEG   KE ++   PQMS+  +KG  V AMG+VEDFIY+N
Sbjct: 1163 RPINSIVVYKDWLYSASDI-VEGSNFKEWKRHSKPQMSMVPDKGASVLAMGIVEDFIYLN 1221

Query: 38   CSLSPSIIEIWL 3
            CS S SI++IWL
Sbjct: 1222 CSSSTSILQIWL 1233


>emb|CAN65866.1| hypothetical protein VITISV_010257 [Vitis vinifera]
          Length = 1378

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/72 (58%), Positives = 54/72 (75%)
 Frame = -3

Query: 218  KPINDILVYRDWLYSARGVLVEGLVLKERRKERNPQMSIPMEKGKRVQAMGVVEDFIYVN 39
            +PIN I+VY+DWLYSA  + VEG   KE ++   PQMS+  +KG  V AMG+VEDFIY+N
Sbjct: 1228 RPINSIVVYKDWLYSASDI-VEGSNFKEWKRHSKPQMSMVPDKGASVLAMGIVEDFIYLN 1286

Query: 38   CSLSPSIIEIWL 3
            CS S SI++IWL
Sbjct: 1287 CSSSTSILQIWL 1298


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