BLASTX nr result

ID: Coptis23_contig00041088 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041088
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330717.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_002267533.2| PREDICTED: quinone-oxidoreductase homolog, c...    58   9e-07
ref|XP_003634840.1| PREDICTED: putative quinone-oxidoreductase h...    58   9e-07
emb|CBI35648.3| unnamed protein product [Vitis vinifera]               58   9e-07
emb|CBI35591.3| unnamed protein product [Vitis vinifera]               58   9e-07

>ref|XP_002330717.1| predicted protein [Populus trichocarpa] gi|222872493|gb|EEF09624.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 26/33 (78%), Positives = 30/33 (90%)
 Frame = -2

Query: 248 LKTVVDSKHPLSNVEEAWSKGIAGHATGKLIVE 150
           LKTV+DSKHPLS  E+AW+KGI GHATGK+IVE
Sbjct: 296 LKTVIDSKHPLSKAEDAWAKGIDGHATGKIIVE 328


>ref|XP_002267533.2| PREDICTED: quinone-oxidoreductase homolog, chloroplastic-like,
           partial [Vitis vinifera]
          Length = 229

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 25/33 (75%), Positives = 29/33 (87%)
 Frame = -2

Query: 248 LKTVVDSKHPLSNVEEAWSKGIAGHATGKLIVE 150
           LKTV+DSKHPLS  E+AW+K I GHATGK+IVE
Sbjct: 196 LKTVIDSKHPLSKAEDAWAKSIDGHATGKIIVE 228


>ref|XP_003634840.1| PREDICTED: putative quinone-oxidoreductase homolog, chloroplastic
           [Vitis vinifera]
          Length = 329

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 25/33 (75%), Positives = 29/33 (87%)
 Frame = -2

Query: 248 LKTVVDSKHPLSNVEEAWSKGIAGHATGKLIVE 150
           LKTV+DSKHPLS  E+AW+K I GHATGK+IVE
Sbjct: 296 LKTVIDSKHPLSKAEDAWAKSIDGHATGKIIVE 328


>emb|CBI35648.3| unnamed protein product [Vitis vinifera]
          Length = 3172

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 25/33 (75%), Positives = 29/33 (87%)
 Frame = -2

Query: 248  LKTVVDSKHPLSNVEEAWSKGIAGHATGKLIVE 150
            LKTV+DSKHPLS  E+AW+K I GHATGK+IVE
Sbjct: 3139 LKTVIDSKHPLSKAEDAWAKSIDGHATGKIIVE 3171


>emb|CBI35591.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 25/33 (75%), Positives = 29/33 (87%)
 Frame = -2

Query: 248 LKTVVDSKHPLSNVEEAWSKGIAGHATGKLIVE 150
           LKTV+DSKHPLS  E+AW+K I GHATGK+IVE
Sbjct: 559 LKTVIDSKHPLSKAEDAWAKSIDGHATGKIIVE 591



 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 23/31 (74%), Positives = 27/31 (87%)
 Frame = -2

Query: 248 LKTVVDSKHPLSNVEEAWSKGIAGHATGKLI 156
           LKTV+DSKHPLS  E+AW+K I GHATGK+I
Sbjct: 193 LKTVIDSKHPLSKAEDAWAKSIDGHATGKII 223


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