BLASTX nr result

ID: Coptis23_contig00041086 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041086
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312212.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002266137.1| PREDICTED: LOB domain-containing protein 6 [...    69   3e-10
ref|XP_002315100.1| predicted protein [Populus trichocarpa] gi|2...    69   5e-10
ref|XP_002514766.1| conserved hypothetical protein [Ricinus comm...    65   7e-09
ref|XP_003545810.1| PREDICTED: LOB domain-containing protein 6-l...    64   1e-08

>ref|XP_002312212.1| predicted protein [Populus trichocarpa] gi|222852032|gb|EEE89579.1|
           predicted protein [Populus trichocarpa]
          Length = 222

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 38/61 (62%), Positives = 45/61 (73%), Gaps = 2/61 (3%)
 Frame = -1

Query: 390 HHHQFFSRDQQQALRSFDANGAYDTSFIAAINVSTNIGPLAQFQQQPRTAGGDDR--IGP 217
           +HHQFF RDQQQ +RSFD+   YD S + A+NVS +IG L+QF QQPR A GDDR  I P
Sbjct: 164 YHHQFFPRDQQQMMRSFDSGNNYDASLL-AMNVSASIGQLSQF-QQPRAATGDDRRTIDP 221

Query: 216 S 214
           S
Sbjct: 222 S 222


>ref|XP_002266137.1| PREDICTED: LOB domain-containing protein 6 [Vitis vinifera]
           gi|296080960|emb|CBI18626.3| unnamed protein product
           [Vitis vinifera]
          Length = 216

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 37/61 (60%), Positives = 45/61 (73%), Gaps = 2/61 (3%)
 Frame = -1

Query: 390 HHHQFFSRDQQQALRSFDANGAYDTSFIAAINVSTNIGPLAQFQQQPRTAGGDDR--IGP 217
           +HHQFF R+QQQ +R+FDA   YD S + A+NVS +IG L+QF  QPR AGGDDR  I P
Sbjct: 158 YHHQFFPREQQQMIRTFDATNNYDASLL-AMNVSASIGQLSQF-HQPRAAGGDDRRSIDP 215

Query: 216 S 214
           S
Sbjct: 216 S 216


>ref|XP_002315100.1| predicted protein [Populus trichocarpa] gi|222864140|gb|EEF01271.1|
           predicted protein [Populus trichocarpa]
          Length = 220

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 37/61 (60%), Positives = 44/61 (72%), Gaps = 2/61 (3%)
 Frame = -1

Query: 390 HHHQFFSRDQQQALRSFDANGAYDTSFIAAINVSTNIGPLAQFQQQPRTAGGDDR--IGP 217
           +HHQFF +DQQQ +RSFDA   YD S + A+NVS +IG L+ F QQPR A GDDR  I P
Sbjct: 162 YHHQFFPKDQQQMMRSFDAGNNYDASLL-AMNVSASIGQLSHF-QQPRAAAGDDRRTIDP 219

Query: 216 S 214
           S
Sbjct: 220 S 220


>ref|XP_002514766.1| conserved hypothetical protein [Ricinus communis]
           gi|223545817|gb|EEF47320.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 218

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 35/57 (61%), Positives = 42/57 (73%), Gaps = 2/57 (3%)
 Frame = -1

Query: 390 HHHQFFSRDQQQALRSFD--ANGAYDTSFIAAINVSTNIGPLAQFQQQPRTAGGDDR 226
           +HHQFF RDQQQ +RSFD  A   YD S + A+NVS +IG L+QF QQPR A G+DR
Sbjct: 157 YHHQFFPRDQQQMMRSFDTAAANTYDASLL-AMNVSASIGQLSQF-QQPRAAAGEDR 211


>ref|XP_003545810.1| PREDICTED: LOB domain-containing protein 6-like [Glycine max]
          Length = 212

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 3/58 (5%)
 Frame = -1

Query: 390 HHHQFFSRDQ---QQALRSFDANGAYDTSFIAAINVSTNIGPLAQFQQQPRTAGGDDR 226
           HHHQFF RDQ   QQ ++SFDA   YD S +A +N+S ++G L Q Q Q  T GGDDR
Sbjct: 153 HHHQFFPRDQHQQQQVVKSFDAGNNYDASLLA-MNISASLGQLNQLQHQSATGGGDDR 209


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