BLASTX nr result

ID: Coptis23_contig00041084 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041084
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537613.1| PREDICTED: disease resistance RPP8-like prot...   126   2e-27
ref|XP_003517205.1| PREDICTED: disease resistance RPP8-like prot...   126   2e-27
ref|XP_002535012.1| Disease resistance protein RPH8A, putative [...   126   2e-27
ref|XP_002336919.1| cc-nbs-lrr resistance protein [Populus trich...   118   6e-25
ref|XP_003633451.1| PREDICTED: probable disease resistance prote...   117   1e-24

>ref|XP_003537613.1| PREDICTED: disease resistance RPP8-like protein 3-like [Glycine
           max]
          Length = 912

 Score =  126 bits (317), Expect = 2e-27
 Identities = 64/100 (64%), Positives = 79/100 (79%), Gaps = 1/100 (1%)
 Frame = -3

Query: 298 EMVKRCGGLPLAIVVLGGLLLTK-KTWDEWVEVHHNISWHLHKGDEDRISKILALSYNDL 122
           E+V +CGGLPLA+VV+GGLL  K K+  EW  V  NISWHL + ++++I++ILALSYNDL
Sbjct: 354 EIVVKCGGLPLAVVVVGGLLSRKLKSSGEWKRVLQNISWHLLE-EQEKIARILALSYNDL 412

Query: 121 PHHLKSCFLYFSHFPDDSNIRAKKLIRLWVAEGFIPQERE 2
           P HLKSCFLY   FP+  NI+ KKLIRLWVAEGF+ QE E
Sbjct: 413 PPHLKSCFLYLGLFPEGVNIQTKKLIRLWVAEGFLLQEGE 452


>ref|XP_003517205.1| PREDICTED: disease resistance RPP8-like protein 3-like [Glycine
           max]
          Length = 910

 Score =  126 bits (317), Expect = 2e-27
 Identities = 64/100 (64%), Positives = 79/100 (79%), Gaps = 1/100 (1%)
 Frame = -3

Query: 298 EMVKRCGGLPLAIVVLGGLLLTK-KTWDEWVEVHHNISWHLHKGDEDRISKILALSYNDL 122
           E+V +CGGLPLA+VV+GGLL  K K+  EW  V  NISWHL + ++++I++ILALSYNDL
Sbjct: 353 EIVVKCGGLPLAVVVVGGLLSRKLKSSGEWKRVLQNISWHLLE-EQEKIARILALSYNDL 411

Query: 121 PHHLKSCFLYFSHFPDDSNIRAKKLIRLWVAEGFIPQERE 2
           P HLKSCFLY   FP+  NI+ KKLIRLWVAEGF+ QE E
Sbjct: 412 PPHLKSCFLYLGLFPEGVNIQTKKLIRLWVAEGFLLQEGE 451


>ref|XP_002535012.1| Disease resistance protein RPH8A, putative [Ricinus communis]
           gi|223524193|gb|EEF27370.1| Disease resistance protein
           RPH8A, putative [Ricinus communis]
          Length = 808

 Score =  126 bits (317), Expect = 2e-27
 Identities = 63/100 (63%), Positives = 77/100 (77%), Gaps = 1/100 (1%)
 Frame = -3

Query: 298 EMVKRCGGLPLAIVVLGGLLLTKKTW-DEWVEVHHNISWHLHKGDEDRISKILALSYNDL 122
           ++V +CGGLPLA+VVLGGLL  +    +EW  V HNISWHL +G EDR + +LALSYNDL
Sbjct: 348 DIVVKCGGLPLAVVVLGGLLSRQNNSPEEWRRVLHNISWHLIRG-EDRTAAVLALSYNDL 406

Query: 121 PHHLKSCFLYFSHFPDDSNIRAKKLIRLWVAEGFIPQERE 2
           P HLKSCFLY   FP+D +I+ +KLI LWVAEGF+P E E
Sbjct: 407 PLHLKSCFLYLGLFPEDVSIQREKLIHLWVAEGFLPLEGE 446


>ref|XP_002336919.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222837129|gb|EEE75508.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 605

 Score =  118 bits (295), Expect = 6e-25
 Identities = 56/98 (57%), Positives = 73/98 (74%), Gaps = 4/98 (4%)
 Frame = -3

Query: 298 EMVKRCGGLPLAIVVLGGLLLTKKTWDEWVEVHHNISWHLHKGDEDR----ISKILALSY 131
           EMV RC GLPLAI+VLGGLL TKKT  EW  V  NI  HL +G  D     ++++LALSY
Sbjct: 212 EMVGRCTGLPLAIIVLGGLLATKKTTFEWDVVRKNIISHLRRGKGDEQLLGVAEVLALSY 271

Query: 130 NDLPHHLKSCFLYFSHFPDDSNIRAKKLIRLWVAEGFI 17
           ++LP+ LK CFL+ +HFP+D  I+ KK++R+WVAEGF+
Sbjct: 272 HELPYQLKPCFLHLAHFPEDCEIQTKKMLRMWVAEGFV 309


>ref|XP_003633451.1| PREDICTED: probable disease resistance protein RDL6/RF9-like [Vitis
           vinifera]
          Length = 955

 Score =  117 bits (293), Expect = 1e-24
 Identities = 57/105 (54%), Positives = 75/105 (71%), Gaps = 6/105 (5%)
 Frame = -3

Query: 298 EMVKRCGGLPLAIVVLGGLLLTKKTWDEWVEVHHNISWHLHKGDEDR------ISKILAL 137
           EMV+ CGGLPLAIVVLGGLL TK T+ EW  V  NI  +L +G ++       +S +LAL
Sbjct: 360 EMVRYCGGLPLAIVVLGGLLATKHTFYEWERVQRNIKSYLRRGKDNYEQQGSGVSDVLAL 419

Query: 136 SYNDLPHHLKSCFLYFSHFPDDSNIRAKKLIRLWVAEGFIPQERE 2
           SY DLP++LKSCFLY ++FP+D  I  + L+++WVAEG I + RE
Sbjct: 420 SYQDLPYYLKSCFLYLANFPEDYEIPTRPLVQMWVAEGIISEARE 464


Top