BLASTX nr result

ID: Coptis23_contig00041052 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041052
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago tr...    92   6e-17
ref|XP_002325800.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11
ref|XP_002332212.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11
ref|XP_002331745.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11
ref|XP_002331231.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11

>gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago truncatula]
          Length = 814

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 40/102 (39%), Positives = 60/102 (58%)
 Frame = +1

Query: 1   LNKFRRENNLCLFAMVETKVRIEKFQLISSLCCPSWPFVNNYSSGDSGRIWISWDPGVIA 180
           +  F  +N   +  +VET+++ +KF  ISS+    WP +NNY S  +GRIW+SW+P V+ 
Sbjct: 537 IKNFLLKNKFDMCILVETRIKADKFNKISSMIFKRWPVLNNYDSAANGRIWVSWNPTVLD 596

Query: 181 LSKIKETEQLIHCKIDLLPSLKSFFFTVIYASNNSADRTRLW 306
           +  I  + Q IHC++D L S + F F  +YA N    R  LW
Sbjct: 597 VKPIASSAQAIHCEVDNLTSSECFNFVAVYAFNTLEQRKELW 638


>ref|XP_002325800.1| predicted protein [Populus trichocarpa] gi|222862675|gb|EEF00182.1|
           predicted protein [Populus trichocarpa]
          Length = 509

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 33/105 (31%), Positives = 58/105 (55%)
 Frame = +1

Query: 1   LNKFRRENNLCLFAMVETKVRIEKFQLISSLCCPSWPFVNNYSSGDSGRIWISWDPGVIA 180
           L +   +  + LF +VET+V+ +    +S L   SW F+ NY+    GRIW+ W+   + 
Sbjct: 319 LRRLIHQEKIALFGLVETRVKDKNKDNVSQLLLRSWSFLYNYAFSCRGRIWVCWNADTVK 378

Query: 181 LSKIKETEQLIHCKIDLLPSLKSFFFTVIYASNNSADRTRLWAEI 315
           +     ++Q IH  + +L +  SF  ++IY  NN++ R  LW++I
Sbjct: 379 VDVFGMSDQAIHVSVTILATNISFNTSIIYGDNNASLREALWSDI 423


>ref|XP_002332212.1| predicted protein [Populus trichocarpa] gi|222874876|gb|EEF12007.1|
           predicted protein [Populus trichocarpa]
          Length = 603

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 33/105 (31%), Positives = 57/105 (54%)
 Frame = +1

Query: 1   LNKFRRENNLCLFAMVETKVRIEKFQLISSLCCPSWPFVNNYSSGDSGRIWISWDPGVIA 180
           L +   +  + LF +VET+V+ +    +S L   SW F+ NY     GRIW+ W+   + 
Sbjct: 337 LRRLIHQERIALFGLVETRVKDKNKDNVSQLLLRSWSFLYNYDFSCHGRIWVCWNADTVK 396

Query: 181 LSKIKETEQLIHCKIDLLPSLKSFFFTVIYASNNSADRTRLWAEI 315
           +     ++Q IH  + +L +  SF  ++IY  NN++ R  LW++I
Sbjct: 397 VDVFGMSDQAIHVSVTILATNISFNTSIIYGDNNASLREALWSDI 441


>ref|XP_002331745.1| predicted protein [Populus trichocarpa] gi|222874271|gb|EEF11402.1|
           predicted protein [Populus trichocarpa]
          Length = 317

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 33/105 (31%), Positives = 57/105 (54%)
 Frame = +1

Query: 1   LNKFRRENNLCLFAMVETKVRIEKFQLISSLCCPSWPFVNNYSSGDSGRIWISWDPGVIA 180
           L +   +  + LF +VET+V+ +    +S L   SW F+ NY     GRIW+ W+   + 
Sbjct: 136 LRRLIHQERIALFGLVETRVKDKNKDNVSQLLLRSWSFLYNYDFSCRGRIWVCWNADTVK 195

Query: 181 LSKIKETEQLIHCKIDLLPSLKSFFFTVIYASNNSADRTRLWAEI 315
           +     ++Q IH  + +L +  SF  ++IY  NN++ R  LW++I
Sbjct: 196 VDVFGMSDQAIHVSVTILATNISFNTSIIYGDNNASLREALWSDI 240


>ref|XP_002331231.1| predicted protein [Populus trichocarpa] gi|222873417|gb|EEF10548.1|
           predicted protein [Populus trichocarpa]
          Length = 130

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 33/105 (31%), Positives = 58/105 (55%)
 Frame = +1

Query: 1   LNKFRRENNLCLFAMVETKVRIEKFQLISSLCCPSWPFVNNYSSGDSGRIWISWDPGVIA 180
           L +   +  + LFA+VET+VR +    +S L   +W F+ NY     GRIW+ W+   + 
Sbjct: 20  LRRLIHQERITLFALVETRVRHKNKDNVSQLLLRNWSFLYNYDFSCRGRIWVCWNADTVK 79

Query: 181 LSKIKETEQLIHCKIDLLPSLKSFFFTVIYASNNSADRTRLWAEI 315
           +  +  ++Q IH  + +L +   F  ++IY  NN++ R  LW++I
Sbjct: 80  VDVLGMSDQAIHVSVTILATNICFNTSIIYGDNNASLREALWSDI 124


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