BLASTX nr result
ID: Coptis23_contig00041052
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00041052 (318 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago tr... 92 6e-17 ref|XP_002325800.1| predicted protein [Populus trichocarpa] gi|2... 73 3e-11 ref|XP_002332212.1| predicted protein [Populus trichocarpa] gi|2... 72 4e-11 ref|XP_002331745.1| predicted protein [Populus trichocarpa] gi|2... 72 4e-11 ref|XP_002331231.1| predicted protein [Populus trichocarpa] gi|2... 72 4e-11 >gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago truncatula] Length = 814 Score = 91.7 bits (226), Expect = 6e-17 Identities = 40/102 (39%), Positives = 60/102 (58%) Frame = +1 Query: 1 LNKFRRENNLCLFAMVETKVRIEKFQLISSLCCPSWPFVNNYSSGDSGRIWISWDPGVIA 180 + F +N + +VET+++ +KF ISS+ WP +NNY S +GRIW+SW+P V+ Sbjct: 537 IKNFLLKNKFDMCILVETRIKADKFNKISSMIFKRWPVLNNYDSAANGRIWVSWNPTVLD 596 Query: 181 LSKIKETEQLIHCKIDLLPSLKSFFFTVIYASNNSADRTRLW 306 + I + Q IHC++D L S + F F +YA N R LW Sbjct: 597 VKPIASSAQAIHCEVDNLTSSECFNFVAVYAFNTLEQRKELW 638 >ref|XP_002325800.1| predicted protein [Populus trichocarpa] gi|222862675|gb|EEF00182.1| predicted protein [Populus trichocarpa] Length = 509 Score = 72.8 bits (177), Expect = 3e-11 Identities = 33/105 (31%), Positives = 58/105 (55%) Frame = +1 Query: 1 LNKFRRENNLCLFAMVETKVRIEKFQLISSLCCPSWPFVNNYSSGDSGRIWISWDPGVIA 180 L + + + LF +VET+V+ + +S L SW F+ NY+ GRIW+ W+ + Sbjct: 319 LRRLIHQEKIALFGLVETRVKDKNKDNVSQLLLRSWSFLYNYAFSCRGRIWVCWNADTVK 378 Query: 181 LSKIKETEQLIHCKIDLLPSLKSFFFTVIYASNNSADRTRLWAEI 315 + ++Q IH + +L + SF ++IY NN++ R LW++I Sbjct: 379 VDVFGMSDQAIHVSVTILATNISFNTSIIYGDNNASLREALWSDI 423 >ref|XP_002332212.1| predicted protein [Populus trichocarpa] gi|222874876|gb|EEF12007.1| predicted protein [Populus trichocarpa] Length = 603 Score = 72.4 bits (176), Expect = 4e-11 Identities = 33/105 (31%), Positives = 57/105 (54%) Frame = +1 Query: 1 LNKFRRENNLCLFAMVETKVRIEKFQLISSLCCPSWPFVNNYSSGDSGRIWISWDPGVIA 180 L + + + LF +VET+V+ + +S L SW F+ NY GRIW+ W+ + Sbjct: 337 LRRLIHQERIALFGLVETRVKDKNKDNVSQLLLRSWSFLYNYDFSCHGRIWVCWNADTVK 396 Query: 181 LSKIKETEQLIHCKIDLLPSLKSFFFTVIYASNNSADRTRLWAEI 315 + ++Q IH + +L + SF ++IY NN++ R LW++I Sbjct: 397 VDVFGMSDQAIHVSVTILATNISFNTSIIYGDNNASLREALWSDI 441 >ref|XP_002331745.1| predicted protein [Populus trichocarpa] gi|222874271|gb|EEF11402.1| predicted protein [Populus trichocarpa] Length = 317 Score = 72.4 bits (176), Expect = 4e-11 Identities = 33/105 (31%), Positives = 57/105 (54%) Frame = +1 Query: 1 LNKFRRENNLCLFAMVETKVRIEKFQLISSLCCPSWPFVNNYSSGDSGRIWISWDPGVIA 180 L + + + LF +VET+V+ + +S L SW F+ NY GRIW+ W+ + Sbjct: 136 LRRLIHQERIALFGLVETRVKDKNKDNVSQLLLRSWSFLYNYDFSCRGRIWVCWNADTVK 195 Query: 181 LSKIKETEQLIHCKIDLLPSLKSFFFTVIYASNNSADRTRLWAEI 315 + ++Q IH + +L + SF ++IY NN++ R LW++I Sbjct: 196 VDVFGMSDQAIHVSVTILATNISFNTSIIYGDNNASLREALWSDI 240 >ref|XP_002331231.1| predicted protein [Populus trichocarpa] gi|222873417|gb|EEF10548.1| predicted protein [Populus trichocarpa] Length = 130 Score = 72.4 bits (176), Expect = 4e-11 Identities = 33/105 (31%), Positives = 58/105 (55%) Frame = +1 Query: 1 LNKFRRENNLCLFAMVETKVRIEKFQLISSLCCPSWPFVNNYSSGDSGRIWISWDPGVIA 180 L + + + LFA+VET+VR + +S L +W F+ NY GRIW+ W+ + Sbjct: 20 LRRLIHQERITLFALVETRVRHKNKDNVSQLLLRNWSFLYNYDFSCRGRIWVCWNADTVK 79 Query: 181 LSKIKETEQLIHCKIDLLPSLKSFFFTVIYASNNSADRTRLWAEI 315 + + ++Q IH + +L + F ++IY NN++ R LW++I Sbjct: 80 VDVLGMSDQAIHVSVTILATNICFNTSIIYGDNNASLREALWSDI 124