BLASTX nr result

ID: Coptis23_contig00041050 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041050
         (486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301101.1| predicted protein [Populus trichocarpa] gi|2...   263   8e-69
ref|XP_002510003.1| multidrug resistance pump, putative [Ricinus...   259   1e-67
emb|CBI19327.3| unnamed protein product [Vitis vinifera]              259   2e-67
ref|XP_002283609.1| PREDICTED: multidrug and toxin extrusion pro...   259   2e-67
ref|XP_003527862.1| PREDICTED: multidrug and toxin extrusion pro...   253   9e-66

>ref|XP_002301101.1| predicted protein [Populus trichocarpa] gi|222842827|gb|EEE80374.1|
           predicted protein [Populus trichocarpa]
          Length = 528

 Score =  263 bits (673), Expect = 8e-69
 Identities = 130/161 (80%), Positives = 141/161 (87%)
 Frame = +2

Query: 2   FPSSLSFGVSTRVGNELGANRPAKARISMIVSLACAVALGIVAMLFATLMRHEWGRLFTS 181
           FPSSLS GVSTRVGNELGANRPAKARISMIVSL CAVALG++AMLF TLMRH+WGR FT+
Sbjct: 301 FPSSLSLGVSTRVGNELGANRPAKARISMIVSLVCAVALGLMAMLFTTLMRHQWGRFFTN 360

Query: 182 DTEILELTAIALPIAGLCEIGNCPQTTGCGVLRGSARPTIGANINLGSFYLVGMPVAILM 361
           D EILELT+IALPIAGLCE+GNCPQTTGCGVLRGSARPTIGANINLGSFYLVGMPVA+ +
Sbjct: 361 DAEILELTSIALPIAGLCELGNCPQTTGCGVLRGSARPTIGANINLGSFYLVGMPVAMFL 420

Query: 362 GFVAKMXXXXXXXXXXAAQASCALLMFYVLGKTDWLLQVQR 484
           GFVAKM          AAQASCALLM Y L  TDW++QV+R
Sbjct: 421 GFVAKMGFAGLWLGLLAAQASCALLMLYALCTTDWMVQVER 461


>ref|XP_002510003.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223550704|gb|EEF52190.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 528

 Score =  259 bits (663), Expect = 1e-67
 Identities = 127/161 (78%), Positives = 139/161 (86%)
 Frame = +2

Query: 2   FPSSLSFGVSTRVGNELGANRPAKARISMIVSLACAVALGIVAMLFATLMRHEWGRLFTS 181
           FPSSLS GVSTRVGNELGANRPAKARISMIVSL+CAV LG++AMLF TLMRH+WGR FT+
Sbjct: 300 FPSSLSLGVSTRVGNELGANRPAKARISMIVSLSCAVGLGLLAMLFTTLMRHQWGRFFTN 359

Query: 182 DTEILELTAIALPIAGLCEIGNCPQTTGCGVLRGSARPTIGANINLGSFYLVGMPVAILM 361
           D EILELTA+ALPI GLCE+GNCPQT GCGVLRGSARPTIGANINLGSFYLVGMPV +LM
Sbjct: 360 DVEILELTAVALPIVGLCELGNCPQTAGCGVLRGSARPTIGANINLGSFYLVGMPVGMLM 419

Query: 362 GFVAKMXXXXXXXXXXAAQASCALLMFYVLGKTDWLLQVQR 484
           GFVAKM          AAQASCA+LM YVL +TDW +Q +R
Sbjct: 420 GFVAKMGFAGLWLGLLAAQASCAILMLYVLCRTDWSVQAER 460


>emb|CBI19327.3| unnamed protein product [Vitis vinifera]
          Length = 576

 Score =  259 bits (661), Expect = 2e-67
 Identities = 127/161 (78%), Positives = 139/161 (86%)
 Frame = +2

Query: 2   FPSSLSFGVSTRVGNELGANRPAKARISMIVSLACAVALGIVAMLFATLMRHEWGRLFTS 181
           FPS+LS GVSTRVGNELGANRPAKARI MIVSL CAVALG+ AMLF TLMRH+WGR FT+
Sbjct: 301 FPSALSLGVSTRVGNELGANRPAKARICMIVSLFCAVALGLAAMLFTTLMRHQWGRFFTN 360

Query: 182 DTEILELTAIALPIAGLCEIGNCPQTTGCGVLRGSARPTIGANINLGSFYLVGMPVAILM 361
           D E+LELTA+ALPIAGLCE+GNCPQTTGCGVLRGSARPT GANINLGSFYLVGMPVAI+M
Sbjct: 361 DAEVLELTAVALPIAGLCELGNCPQTTGCGVLRGSARPTEGANINLGSFYLVGMPVAIIM 420

Query: 362 GFVAKMXXXXXXXXXXAAQASCALLMFYVLGKTDWLLQVQR 484
           GFVAKM          AAQ SCA LM YVL +TDW++QV+R
Sbjct: 421 GFVAKMGFAGLWLGLLAAQTSCAFLMLYVLCRTDWVVQVKR 461


>ref|XP_002283609.1| PREDICTED: multidrug and toxin extrusion protein 1 [Vitis vinifera]
           gi|147802486|emb|CAN77415.1| hypothetical protein
           VITISV_000475 [Vitis vinifera]
          Length = 527

 Score =  259 bits (661), Expect = 2e-67
 Identities = 127/161 (78%), Positives = 139/161 (86%)
 Frame = +2

Query: 2   FPSSLSFGVSTRVGNELGANRPAKARISMIVSLACAVALGIVAMLFATLMRHEWGRLFTS 181
           FPS+LS GVSTRVGNELGANRPAKARI MIVSL CAVALG+ AMLF TLMRH+WGR FT+
Sbjct: 301 FPSALSLGVSTRVGNELGANRPAKARICMIVSLFCAVALGLAAMLFTTLMRHQWGRFFTN 360

Query: 182 DTEILELTAIALPIAGLCEIGNCPQTTGCGVLRGSARPTIGANINLGSFYLVGMPVAILM 361
           D E+LELTA+ALPIAGLCE+GNCPQTTGCGVLRGSARPT GANINLGSFYLVGMPVAI+M
Sbjct: 361 DAEVLELTAVALPIAGLCELGNCPQTTGCGVLRGSARPTEGANINLGSFYLVGMPVAIIM 420

Query: 362 GFVAKMXXXXXXXXXXAAQASCALLMFYVLGKTDWLLQVQR 484
           GFVAKM          AAQ SCA LM YVL +TDW++QV+R
Sbjct: 421 GFVAKMGFAGLWLGLLAAQTSCAFLMLYVLCRTDWVVQVKR 461


>ref|XP_003527862.1| PREDICTED: multidrug and toxin extrusion protein 1-like [Glycine
           max]
          Length = 548

 Score =  253 bits (647), Expect = 9e-66
 Identities = 126/161 (78%), Positives = 134/161 (83%)
 Frame = +2

Query: 2   FPSSLSFGVSTRVGNELGANRPAKARISMIVSLACAVALGIVAMLFATLMRHEWGRLFTS 181
           FPSSLS  VSTRVGNELGANRPAKARISMIVSLACAVALG+ AMLF TLMRH WGR FTS
Sbjct: 331 FPSSLSLAVSTRVGNELGANRPAKARISMIVSLACAVALGVTAMLFTTLMRHRWGRFFTS 390

Query: 182 DTEILELTAIALPIAGLCEIGNCPQTTGCGVLRGSARPTIGANINLGSFYLVGMPVAILM 361
           D +IL LT+IALPI GLCE+GNCPQTTGCGVLRGSARPT+GANINLGSFYLVGMPVA+L+
Sbjct: 391 DQQILHLTSIALPIVGLCELGNCPQTTGCGVLRGSARPTVGANINLGSFYLVGMPVAVLL 450

Query: 362 GFVAKMXXXXXXXXXXAAQASCALLMFYVLGKTDWLLQVQR 484
           GFV KM          AAQ SCA LM +VL  TDW  QVQR
Sbjct: 451 GFVGKMGFPGLWLGLLAAQGSCAALMIFVLCTTDWNAQVQR 491


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