BLASTX nr result

ID: Coptis23_contig00041007 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041007
         (218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB65155.1| acidic cellulase [Citrus sinensis]                     100   2e-19
emb|CBI34594.3| unnamed protein product [Vitis vinifera]              100   2e-19
emb|CAA65597.1| endo-beta-1,4-glucanase [Prunus persica] gi|1657...    97   1e-18
gb|AFZ78635.1| korrigan [Populus tomentosa]                            94   9e-18
ref|XP_002299423.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17

>gb|AAB65155.1| acidic cellulase [Citrus sinensis]
          Length = 505

 Score =  100 bits (248), Expect = 2e-19
 Identities = 46/56 (82%), Positives = 53/56 (94%)
 Frame = +3

Query: 51  LSLCCSAFTSEDYSNALGKSILFFEGQRSGKLPPSQRLTWRGDSALSDGTSYHVDL 218
           LSL CSAFT +DYS+ALGKSILFFEGQRSG+LPP+Q+LTWRG+S LSDG+SYHVDL
Sbjct: 29  LSLLCSAFTFQDYSDALGKSILFFEGQRSGRLPPNQQLTWRGNSGLSDGSSYHVDL 84


>emb|CBI34594.3| unnamed protein product [Vitis vinifera]
          Length = 419

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 46/57 (80%), Positives = 53/57 (92%)
 Frame = +3

Query: 48  MLSLCCSAFTSEDYSNALGKSILFFEGQRSGKLPPSQRLTWRGDSALSDGTSYHVDL 218
           +L+L CSAFTS+DY++AL KSILF+EGQRSGKLP SQRLTWRGDS LSDG+SYHVDL
Sbjct: 20  LLTLSCSAFTSKDYADALAKSILFYEGQRSGKLPSSQRLTWRGDSGLSDGSSYHVDL 76


>emb|CAA65597.1| endo-beta-1,4-glucanase [Prunus persica] gi|1657380|emb|CAA65600.1|
           endo-beta-1,4-glucanase [Prunus persica]
          Length = 497

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 45/57 (78%), Positives = 51/57 (89%)
 Frame = +3

Query: 48  MLSLCCSAFTSEDYSNALGKSILFFEGQRSGKLPPSQRLTWRGDSALSDGTSYHVDL 218
           +LSLCCSAFT +DYS+AL KSILFFEGQRSGKLP +QR TWR +S LSDG+SYHVDL
Sbjct: 20  LLSLCCSAFTPQDYSDALEKSILFFEGQRSGKLPANQRATWRANSGLSDGSSYHVDL 76


>gb|AFZ78635.1| korrigan [Populus tomentosa]
          Length = 494

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 48/76 (63%), Positives = 57/76 (75%), Gaps = 5/76 (6%)
 Frame = +3

Query: 6   MAFNRIFWLMQLTWMLSLCCS-----AFTSEDYSNALGKSILFFEGQRSGKLPPSQRLTW 170
           MA    F LM   + ++ CC      AFTS+DY+NAL KSILFFEGQRSGKLP +QRLTW
Sbjct: 1   MASATTFSLMLQFFFITFCCLSYFSFAFTSQDYANALEKSILFFEGQRSGKLPSNQRLTW 60

Query: 171 RGDSALSDGTSYHVDL 218
           RGDS LSDG++YHV+L
Sbjct: 61  RGDSGLSDGSTYHVNL 76


>ref|XP_002299423.1| predicted protein [Populus trichocarpa] gi|222846681|gb|EEE84228.1|
           predicted protein [Populus trichocarpa]
           gi|347466577|gb|AEO97201.1| endo-1,4-beta-glucanase
           [Populus trichocarpa] gi|347466631|gb|AEO97228.1|
           endo-1,4-beta-glucanase [Populus trichocarpa]
          Length = 494

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 48/76 (63%), Positives = 57/76 (75%), Gaps = 5/76 (6%)
 Frame = +3

Query: 6   MAFNRIFWLMQLTWMLSLCCS-----AFTSEDYSNALGKSILFFEGQRSGKLPPSQRLTW 170
           MA    F LM   + ++ CC      AFTS+DY+NAL KSILFFEGQRSGKLP +QRLTW
Sbjct: 1   MANATTFSLMLQFFFITFCCLSYFSFAFTSQDYANALEKSILFFEGQRSGKLPSNQRLTW 60

Query: 171 RGDSALSDGTSYHVDL 218
           RGDS LSDG++YHV+L
Sbjct: 61  RGDSGLSDGSTYHVNL 76


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