BLASTX nr result

ID: Coptis23_contig00041002 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041002
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66301.1| hypothetical protein VITISV_029373 [Vitis vinifera]   165   3e-39
emb|CAN77210.1| hypothetical protein VITISV_000141 [Vitis vinifera]   157   4e-39
emb|CAN63507.1| hypothetical protein VITISV_029435 [Vitis vinifera]   156   5e-39
emb|CAN77046.1| hypothetical protein VITISV_035257 [Vitis vinifera]   157   6e-39
emb|CAN60274.1| hypothetical protein VITISV_024841 [Vitis vinifera]   155   8e-39

>emb|CAN66301.1| hypothetical protein VITISV_029373 [Vitis vinifera]
          Length = 1041

 Score =  165 bits (418), Expect = 3e-39
 Identities = 75/143 (52%), Positives = 106/143 (74%)
 Frame = -3

Query: 482 SPVPSTLGFRYFVLFIDDYTRVTWVYLMKTKDEMYSIFQKFIVMVKTQFDKTIKTIRSDQ 303
           SPV ++ G R+FV+F+DD TR+TW+YL+K KDE++ +FQ F  MV+TQF   IK +RSD 
Sbjct: 264 SPVTTSSGHRWFVIFVDDCTRMTWLYLLKHKDEVFVVFQSFHTMVQTQFSTKIKILRSDN 323

Query: 302 GGEYTYGGVTKLCDELGIMHQFSCVKTPQQNGRSERKNRHILDLARAISIGMNVPKIFWA 123
           GGEY    +    +  GI+H+ SC +TPQQNG +ERKNRHIL+ ARA+ +  +VP  +W+
Sbjct: 324 GGEYVNQQIQTYFNSHGILHETSCSQTPQQNGTAERKNRHILETARALLLNAHVPNRYWS 383

Query: 122 DVVFTAVQMINRTPSRLLQFKTP 54
           DVV TAV ++N  P+++LQF+TP
Sbjct: 384 DVVATAVHLLNSMPTKVLQFQTP 406


>emb|CAN77210.1| hypothetical protein VITISV_000141 [Vitis vinifera]
          Length = 1236

 Score =  157 bits (397), Expect(2) = 4e-39
 Identities = 75/140 (53%), Positives = 96/140 (68%)
 Frame = -3

Query: 470 STLGFRYFVLFIDDYTRVTWVYLMKTKDEMYSIFQKFIVMVKTQFDKTIKTIRSDQGGEY 291
           STLGF+YFV FIDDY+R TW++LMK + E++SIFQKF   ++TQF+ +I  +RSD   EY
Sbjct: 439 STLGFQYFVTFIDDYSRCTWLFLMKNRAELFSIFQKFYAEIQTQFNISIHVLRSDNAREY 498

Query: 290 TYGGVTKLCDELGIMHQFSCVKTPQQNGRSERKNRHILDLARAISIGMNVPKIFWADVVF 111
                T      GI+HQ SC  TPQQNG +ERKNRH+++ AR I +  NVP  FW DVV 
Sbjct: 499 FSAPFTSFMSHHGILHQSSCAHTPQQNGVAERKNRHLVETARTILLHSNVPFRFWGDVVL 558

Query: 110 TAVQMINRTPSRLLQFKTPH 51
           TA  +INR PS +L  + PH
Sbjct: 559 TACYLINRMPSSVLHDQIPH 578



 Score = 29.3 bits (64), Expect(2) = 4e-39
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -1

Query: 55  HILLYPTSPLFLIPPNVF 2
           H LL+P  PL+ +PP VF
Sbjct: 578 HSLLFPNQPLYFLPPRVF 595


>emb|CAN63507.1| hypothetical protein VITISV_029435 [Vitis vinifera]
          Length = 1211

 Score =  156 bits (395), Expect(2) = 5e-39
 Identities = 74/140 (52%), Positives = 97/140 (69%)
 Frame = -3

Query: 470 STLGFRYFVLFIDDYTRVTWVYLMKTKDEMYSIFQKFIVMVKTQFDKTIKTIRSDQGGEY 291
           STLGF+YFV FIDDY+R TW++LMK + E++SIFQKF V ++TQF+ +I+ +R+D   EY
Sbjct: 503 STLGFQYFVTFIDDYSRCTWLFLMKNRAELFSIFQKFYVEIQTQFNISIRVLRNDNAREY 562

Query: 290 TYGGVTKLCDELGIMHQFSCVKTPQQNGRSERKNRHILDLARAISIGMNVPKIFWADVVF 111
                T      GI+HQ SC  TPQQNG +ERKNRH+++  R I +  NVP  FW DVV 
Sbjct: 563 FSTPFTSFMSHHGILHQSSCAHTPQQNGVAERKNRHLVETTRTILLHSNVPFRFWGDVVL 622

Query: 110 TAVQMINRTPSRLLQFKTPH 51
           TA  +INR PS +L  + PH
Sbjct: 623 TACYLINRMPSSVLHDQIPH 642



 Score = 29.6 bits (65), Expect(2) = 5e-39
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -1

Query: 55  HILLYPTSPLFLIPPNVF 2
           H LL+P  PL+ +PP VF
Sbjct: 642 HFLLFPDQPLYFLPPRVF 659


>emb|CAN77046.1| hypothetical protein VITISV_035257 [Vitis vinifera]
          Length = 1478

 Score =  157 bits (396), Expect(2) = 6e-39
 Identities = 74/140 (52%), Positives = 97/140 (69%)
 Frame = -3

Query: 470  STLGFRYFVLFIDDYTRVTWVYLMKTKDEMYSIFQKFIVMVKTQFDKTIKTIRSDQGGEY 291
            STLGF+YFV FIDDY+R TW++LMK + E++SIFQKF   ++TQF+ +I+ +RSD   EY
Sbjct: 639  STLGFQYFVTFIDDYSRCTWLFLMKNRAELFSIFQKFYAEIQTQFNISIRVLRSDNAREY 698

Query: 290  TYGGVTKLCDELGIMHQFSCVKTPQQNGRSERKNRHILDLARAISIGMNVPKIFWADVVF 111
                 T      GI+HQ SC  TPQQNG ++RKNRH+++ AR I +  NVP  FW DVV 
Sbjct: 699  FSAPFTSFMSHHGILHQSSCAHTPQQNGVAKRKNRHLVETARTILLHSNVPFRFWGDVVL 758

Query: 110  TAVQMINRTPSRLLQFKTPH 51
            TA  +INR PS +L  + PH
Sbjct: 759  TACYLINRMPSSVLHDQIPH 778



 Score = 28.9 bits (63), Expect(2) = 6e-39
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -1

Query: 55  HILLYPTSPLFLIPPNVF 2
           H LL+P  PL+ +PP VF
Sbjct: 778 HSLLFPDQPLYFLPPRVF 795


>emb|CAN60274.1| hypothetical protein VITISV_024841 [Vitis vinifera]
          Length = 1573

 Score =  155 bits (393), Expect(2) = 8e-39
 Identities = 74/140 (52%), Positives = 96/140 (68%)
 Frame = -3

Query: 470 STLGFRYFVLFIDDYTRVTWVYLMKTKDEMYSIFQKFIVMVKTQFDKTIKTIRSDQGGEY 291
           STLGF+YFV FIDDY+R TW++LMK + E++SIFQKF   ++TQF+ +I+ +RSD   EY
Sbjct: 338 STLGFQYFVTFIDDYSRCTWLFLMKNQAELFSIFQKFYAEIQTQFNISIRVLRSDNAREY 397

Query: 290 TYGGVTKLCDELGIMHQFSCVKTPQQNGRSERKNRHILDLARAISIGMNVPKIFWADVVF 111
                T      GI+HQ SC  TPQQNG +ERKNRH+++ AR I +  NVP  FW D V 
Sbjct: 398 FSTPFTSFMSHHGILHQSSCAHTPQQNGVAERKNRHLVETARTILLHSNVPFHFWGDAVL 457

Query: 110 TAVQMINRTPSRLLQFKTPH 51
           TA  +INR PS +L  + PH
Sbjct: 458 TACYLINRMPSSVLHDQIPH 477



 Score = 29.6 bits (65), Expect(2) = 8e-39
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -1

Query: 55  HILLYPTSPLFLIPPNVF 2
           H LL+P  PL+ IPP VF
Sbjct: 477 HSLLFPDQPLYFIPPRVF 494


Top