BLASTX nr result

ID: Coptis23_contig00040969 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00040969
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283448.1| PREDICTED: PAN domain-containing protein At5...   102   2e-20
emb|CAN62313.1| hypothetical protein VITISV_018205 [Vitis vinifera]   102   2e-20
ref|XP_002311933.1| predicted protein [Populus trichocarpa] gi|2...    99   4e-19
gb|ABK95014.1| unknown [Populus trichocarpa]                           99   4e-19
ref|NP_195990.1| PAN domain-containing protein [Arabidopsis thal...    98   6e-19

>ref|XP_002283448.1| PREDICTED: PAN domain-containing protein At5g03700 [Vitis vinifera]
           gi|297740069|emb|CBI30251.3| unnamed protein product
           [Vitis vinifera]
          Length = 485

 Score =  102 bits (255), Expect = 2e-20
 Identities = 50/95 (52%), Positives = 66/95 (69%), Gaps = 3/95 (3%)
 Frame = +2

Query: 5   FLLLLLYMHFQVKA---QELHKGFSATPDSTSKSFQPLLTDSTNNFSLGFLRVNRSQLTL 175
           FL  + +   Q  A   QEL KGF+ATP+ ++ SFQPLLTD T N+S+GFLRVNR+QL L
Sbjct: 17  FLCTIKWPQIQTAAATSQELLKGFTATPEPSTSSFQPLLTDPTGNYSMGFLRVNRTQLAL 76

Query: 176 AILHLPSSEPTWFVNTTRNLEWSKNNKLLFNGSLV 280
           ++LH+PS+EP W  +  R   WS++    FNGSLV
Sbjct: 77  SVLHVPSAEPLWQADMARLARWSESTHFFFNGSLV 111


>emb|CAN62313.1| hypothetical protein VITISV_018205 [Vitis vinifera]
          Length = 490

 Score =  102 bits (255), Expect = 2e-20
 Identities = 50/95 (52%), Positives = 66/95 (69%), Gaps = 3/95 (3%)
 Frame = +2

Query: 5   FLLLLLYMHFQVKA---QELHKGFSATPDSTSKSFQPLLTDSTNNFSLGFLRVNRSQLTL 175
           FL  + +   Q  A   QEL KGF+ATP+ ++ SFQPLLTD T N+S+GFLRVNR+QL L
Sbjct: 17  FLCTIKWPQIQTAAATSQELLKGFTATPEPSTSSFQPLLTDPTGNYSMGFLRVNRTQLAL 76

Query: 176 AILHLPSSEPTWFVNTTRNLEWSKNNKLLFNGSLV 280
           ++LH+PS+EP W  +  R   WS++    FNGSLV
Sbjct: 77  SVLHVPSAEPLWQADMARLARWSESTHFFFNGSLV 111


>ref|XP_002311933.1| predicted protein [Populus trichocarpa] gi|222851753|gb|EEE89300.1|
           predicted protein [Populus trichocarpa]
          Length = 487

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 48/88 (54%), Positives = 58/88 (65%)
 Frame = +2

Query: 17  LLYMHFQVKAQELHKGFSATPDSTSKSFQPLLTDSTNNFSLGFLRVNRSQLTLAILHLPS 196
           +LY      AQEL  GF A P S+  SFQ LL DST+ FSLGFLRVN++QL L ++HLPS
Sbjct: 24  ILYTCTSATAQELLAGFKANPSSSVSSFQSLLNDSTSTFSLGFLRVNQTQLALTVIHLPS 83

Query: 197 SEPTWFVNTTRNLEWSKNNKLLFNGSLV 280
            +P W  N T +  WS   +L FNGSLV
Sbjct: 84  LQPLWQANPTSSFRWSDKTQLFFNGSLV 111


>gb|ABK95014.1| unknown [Populus trichocarpa]
          Length = 487

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 48/88 (54%), Positives = 58/88 (65%)
 Frame = +2

Query: 17  LLYMHFQVKAQELHKGFSATPDSTSKSFQPLLTDSTNNFSLGFLRVNRSQLTLAILHLPS 196
           +LY      AQEL  GF A P S+  SFQ LL DST+ FSLGFLRVN++QL L ++HLPS
Sbjct: 24  ILYTCTSATAQELLAGFKANPSSSVSSFQSLLNDSTSTFSLGFLRVNQTQLALTVIHLPS 83

Query: 197 SEPTWFVNTTRNLEWSKNNKLLFNGSLV 280
            +P W  N T +  WS   +L FNGSLV
Sbjct: 84  LQPLWQANPTSSFRWSDKTQLFFNGSLV 111


>ref|NP_195990.1| PAN domain-containing protein [Arabidopsis thaliana]
           gi|75181333|sp|Q9LZR8.1|Y5370_ARATH RecName: Full=PAN
           domain-containing protein At5g03700; Flags: Precursor
           gi|7340655|emb|CAB82935.1| S-receptor kinase-like
           protein [Arabidopsis thaliana]
           gi|332003261|gb|AED90644.1| PAN domain-containing
           protein [Arabidopsis thaliana]
          Length = 482

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 52/102 (50%), Positives = 65/102 (63%), Gaps = 9/102 (8%)
 Frame = +2

Query: 2   IFLLLLLYMHFQVKAQ---------ELHKGFSATPDSTSKSFQPLLTDSTNNFSLGFLRV 154
           + LLL +++ F  K Q         EL KGF A PDS+  SFQPLLTDS  NFS GFLRV
Sbjct: 12  VLLLLFVFLVFSHKWQRVNAVEPVLELVKGFEAKPDSSIDSFQPLLTDSNGNFSFGFLRV 71

Query: 155 NRSQLTLAILHLPSSEPTWFVNTTRNLEWSKNNKLLFNGSLV 280
           N S+L+LA+ H   ++P W ++ TR+  WS   KL FNGSLV
Sbjct: 72  NGSRLSLAVTHPNLTDPLWVLDPTRSASWSHKTKLFFNGSLV 113


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